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Histone Chaperone NAP1 Mediates Sister Chromatid Resolution by Counteracting Protein Phosphatase 2A

Yuri M. Moshkin, Cecile M. Doyen, Tsung-Wai Kan, Gillian E. Chalkley, Karen Sap, Karel Bezstarosti, Jeroen A. Demmers, Zeliha Ozgur, Wilfred F. J. van Ijcken, C. Peter Verrijzer

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003719

Rapid Intrahost Evolution of Human Cytomegalovirus Is Shaped by Demography and Positive Selection

Nicholas Renzette, Laura Gibson, Bornali Bhattacharjee, Donna Fisher, Mark R. Schleiss, Jeffrey D. Jensen, Timothy F. Kowalik

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003735

IL-17 Attenuates Degradation of ARE-mRNAs by Changing the Cooperation between AU-Binding Proteins and microRNA16

Saheli Chowdhury, Annemiek Dijkhuis, Sabrina Steiert, René Lutter

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003747

Cooperative Interaction between Phosphorylation Sites on PERIOD Maintains Circadian Period in Drosophila

David S. Garbe, Yanshan Fang, Xiangzhong Zheng, Mallory Sowcik, Rana Anjum, Steven P. Gygi, Amita Sehgal

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003749

Meiotic Recombination in Arabidopsis Is Catalysed by DMC1, with RAD51 Playing a Supporting Role

Olivier Da Ines, Fabienne Degroote, Chantal Goubely, Simon Amiard, Maria E. Gallego, Charles I. White

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003787

Genome-Wide Analysis of ZmDREB Genes and Their Association with Natural Variation in Drought Tolerance at Seedling Stage of Zea mays L

Shengxue Liu, Xianglan Wang, Hongwei Wang, Haibo Xin, Xiaohong Yang, Jianbing Yan, Jiansheng Li, Lam-Son Phan Tran, Kazuo Shinozaki, Kazuko Yamaguchi-Shinozaki, Feng Qin

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003790

Nebula/DSCR1 Upregulation Delays Neurodegeneration and Protects against APP-Induced Axonal Transport Defects by Restoring Calcineurin and GSK-3β Signaling

Jillian L. Shaw, Karen T. Chang

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003792

Ultra-Sensitive Sequencing Reveals an Age-Related Increase in Somatic Mitochondrial Mutations That Are Inconsistent with Oxidative Damage

Scott R. Kennedy, Jesse J. Salk, Michael W. Schmitt, Lawrence A. Loeb

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003794

Fusion of Large-Scale Genomic Knowledge and Frequency Data Computationally Prioritizes Variants in Epilepsy

Ian M. Campbell, Mitchell Rao, Sean D. Arredondo, Seema R. Lalani, Zhilian Xia, Sung-Hae L. Kang, Weimin Bi, Amy M. Breman, Janice L. Smith, Carlos A. Bacino, Arthur L. Beaudet, Ankita Patel, Sau Wai Cheung, James R. Lupski, Paweł Stankiewicz, Melissa B. Ramocki, Chad A. Shaw

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003797

The Highly Prolific Phenotype of Lacaune Sheep Is Associated with an Ectopic Expression of the B4GALNT2 Gene within the Ovary

Laurence Drouilhet, Camille Mansanet, Julien Sarry, Kamila Tabet, Philippe Bardou, Florent Woloszyn, Jérome Lluch, Grégoire Harichaux, Catherine Viguié, Danielle Monniaux, Loys Bodin, Philippe Mulsant, Stéphane Fabre

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003809

Widespread Dysregulation of Peptide Hormone Release in Mice Lacking Adaptor Protein AP-3

Daniel W. Sirkis, Robert H. Edwards, Cédric S. Asensio

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003812

Whole-Exome Sequencing Reveals a Rapid Change in the Frequency of Rare Functional Variants in a Founding Population of Humans

Ferran Casals, Alan Hodgkinson, Julie Hussin, Youssef Idaghdour, Vanessa Bruat, Thibault de Maillard, Jean-Cristophe Grenier, Elias Gbeha, Fadi F. Hamdan, Simon Girard, Jean-François Spinella, Mathieu Larivière, Virginie Saillour, Jasmine Healy, Isabel Fernández, Daniel Sinnett, Jacques L. Michaud, Guy A. Rouleau, Elie Haddad, Françoise Le Deist, Philip Awadalla

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003815

Guanine Holes Are Prominent Targets for Mutation in Cancer and Inherited Disease

Albino Bacolla, Nuri A. Temiz, Ming Yi, Joseph Ivanic, Regina Z. Cer, Duncan E. Donohue, Edward V. Ball, Uma S. Mudunuri, Guliang Wang, Aklank Jain, Natalia Volfovsky, Brian T. Luke, Robert M. Stephens, David N. Cooper, Jack R. Collins, Karen M. Vasquez

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003816

Natural Genetic Transformation Generates a Population of Merodiploids in Streptococcus pneumoniae

Calum Johnston, Stéphanie Caymaris, Aldert Zomer, Hester J. Bootsma, Marc Prudhomme, Chantal Granadel, Peter W. M. Hermans, Patrice Polard, Bernard Martin, Jean-Pierre Claverys

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003819

Ago1 Interacts with RNA Polymerase II and Binds to the Promoters of Actively Transcribed Genes in Human Cancer Cells

Vera Huang, Jiashun Zheng, Zhongxia Qi, Ji Wang, Robert F. Place, Jingwei Yu, Hao Li, Long-Cheng Li

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003821

In Vivo Analysis of Lrig Genes Reveals Redundant and Independent Functions in the Inner Ear

Tony del Rio, Allison M. Nishitani, Wei-Ming Yu, Lisa V. Goodrich

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003824

Manipulating or Superseding Host Recombination Functions: A Dilemma That Shapes Phage Evolvability

Louis-Marie Bobay, Marie Touchon, Eduardo P. C. Rocha

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003825

Binding of NF-κB to Nucleosomes: Effect of Translational Positioning, Nucleosome Remodeling and Linker Histone H1

Imtiaz Nisar Lone, Manu Shubhdarshan Shukla, John Lalith Charles Richard, Zahary Yordanov Peshev, Stefan Dimitrov, Dimitar Angelov

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003830

PKA Controls Calcium Influx into Motor Neurons during a Rhythmic Behavior

Han Wang, Derek Sieburth

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003831

The Molecular Chaperone Hsp90 Is Required for Cell Cycle Exit in Drosophila melanogaster

Jennifer L. Bandura, Huaqi Jiang, Derek W. Nickerson, Bruce A. Edgar

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003835

Whole Genome Sequencing Identifies a Deletion in Protein Phosphatase 2A That Affects Its Stability and Localization in Chlamydomonas reinhardtii

Huawen Lin, Michelle L. Miller, David M. Granas, Susan K. Dutcher

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003841

Dealing with the Evolutionary Downside of CRISPR Immunity: Bacteria and Beneficial Plasmids

Wenyan Jiang, Inbal Maniv, Fawaz Arain, Yaying Wang, Bruce R. Levin, Luciano A. Marraffini

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003844

The Compass-like Locus, Exclusive to the Ambulacrarians, Encodes a Chromatin Insulator Binding Protein in the Sea Urchin Embryo

Vincenzo Cavalieri, Raffaella Melfi, Giovanni Spinelli

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003847

A Critical Role for PDGFRα Signaling in Medial Nasal Process Development

Fenglei He, Philippe Soriano

PLOS Genetics: published September 26, 2013 | https://doi.org/10.1371/journal.pgen.1003851

A Shift to Organismal Stress Resistance in Programmed Cell Death Mutants

Meredith E. Judy, Ayumi Nakamura, Anne Huang, Harli Grant, Helen McCurdy, Kurt F. Weiberth, Fuying Gao, Giovanni Coppola, Cynthia Kenyon, Aimee W. Kao

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003714

Recent Acquisition of Helicobacter pylori by Baka Pygmies

Sandra Nell, Daniel Eibach, Valeria Montano, Ayas Maady, Armand Nkwescheu, Jose Siri, Wael F. Elamin, Daniel Falush, Bodo Linz, Mark Achtman, Yoshan Moodley, Sebastian Suerbaum

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003775

The Prefoldin Complex Regulates Chromatin Dynamics during Transcription Elongation

Gonzalo Millán-Zambrano, Alfonso Rodríguez-Gil, Xenia Peñate, Lola de Miguel-Jiménez, Macarena Morillo-Huesca, Nevan Krogan, Sebastián Chávez

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003776

Maternal Depletion of Piwi, a Component of the RNAi System, Impacts Heterochromatin Formation in Drosophila

Tingting Gu, Sarah C. R. Elgin

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003780

MYB64 and MYB119 Are Required for Cellularization and Differentiation during Female Gametogenesis in Arabidopsis thaliana

David S. Rabiger, Gary N. Drews

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003783

MEIOB Targets Single-Strand DNA and Is Necessary for Meiotic Recombination

Benoit Souquet, Emilie Abby, Roxane Hervé, Friederike Finsterbusch, Sophie Tourpin, Ronan Le Bouffant, Clotilde Duquenne, Sébastien Messiaen, Emmanuelle Martini, Jacqueline Bernardino-Sgherri, Attila Toth, René Habert, Gabriel Livera

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003784

MicroRNA-17-92, a Direct Ap-2α Transcriptional Target, Modulates T-Box Factor Activity in Orofacial Clefting

Jun Wang, Yan Bai, Hong Li, Stephanie B. Greene, Elzbieta Klysik, Wei Yu, Robert J. Schwartz, Trevor J. Williams, James F. Martin

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003785

System-Wide Analysis Reveals a Complex Network of Tumor-Fibroblast Interactions Involved in Tumorigenicity

Megha Rajaram, Jinyu Li, Mikala Egeblad, R. Scott Powers

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003789

miR-1/133a Clusters Cooperatively Specify the Cardiomyogenic Lineage by Adjustment of Myocardin Levels during Embryonic Heart Development

Katharina Wystub, Johannes Besser, Angela Bachmann, Thomas Boettger, Thomas Braun

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003793

Meta-Analysis of Genome-Wide Association Studies Identifies Six New Loci for Serum Calcium Concentrations

Conall M. O'Seaghdha, Hongsheng Wu, Qiong Yang, Karen Kapur, Idris Guessous, Annie Mercier Zuber, Anna Köttgen, Candice Stoudmann, Alexander Teumer, Zoltán Kutalik, Massimo Mangino, Abbas Dehghan, Weihua Zhang, Gudny Eiriksdottir, Guo Li, Toshiko Tanaka, Laura Portas, Lorna M. Lopez, Caroline Hayward, Kurt Lohman, Koichi Matsuda, Sandosh Padmanabhan, Dmitri Firsov, Rossella Sorice, Sheila Ulivi, A. Catharina Brockhaus, Marcus E. Kleber, Anubha Mahajan, Florian D. Ernst, Vilmundur Gudnason, Lenore J. Launer, Aurelien Mace, Eric Boerwinckle, Dan E. Arking, Chizu Tanikawa, Yusuke Nakamura, Morris J. Brown, Jean-Michel Gaspoz, Jean-Marc Theler, David S. Siscovick, Bruce M. Psaty, Sven Bergmann, Peter Vollenweider, Veronique Vitart, Alan F. Wright, Tatijana Zemunik, Mladen Boban, Ivana Kolcic, Pau Navarro, Edward M. Brown, Karol Estrada, Jingzhong Ding, Tamara B. Harris, Stefania Bandinelli, Dena Hernandez, Andrew B. Singleton, Giorgia Girotto, Daniela Ruggiero, Adamo Pio d'Adamo, Antonietta Robino, Thomas Meitinger, Christa Meisinger, Gail Davies, John M. Starr, John C. Chambers, Bernhard O. Boehm, Bernhard R. Winkelmann, Jie Huang, Federico Murgia, Sarah H. Wild, Harry Campbell, Andrew P. Morris, Oscar H. Franco, Albert Hofman, Andre G. Uitterlinden, Fernando Rivadeneira, Uwe Völker, Anke Hannemann, Reiner Biffar, Wolfgang Hoffmann, So–Youn Shin, Pierre Lescuyer, Hughes Henry, Claudia Schurmann, The SUNLIGHT consortium, The GEFOS consortium, Patricia B. Munroe, Paolo Gasparini, Nicola Pirastu, Marina Ciullo, Christian Gieger, Winfried März, Lars Lind, Tim D. Spector, Albert V. Smith, Igor Rudan, James F. Wilson, Ozren Polasek, Ian J. Deary, Mario Pirastu, Luigi Ferrucci, Yongmei Liu, Bryan Kestenbaum, Jaspal S. Kooner, Jacqueline C. M. Witteman, Matthias Nauck, W. H. Linda Kao, Henri Wallaschofski, Olivier Bonny, Caroline S. Fox, Murielle Bochud

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003796

N-acetylglucosamine (GlcNAc) Triggers a Rapid, Temperature-Responsive Morphogenetic Program in Thermally Dimorphic Fungi

Sarah A. Gilmore, Shamoon Naseem, James B. Konopka, Anita Sil

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003799

Mitochondrial Transcription Terminator Family Members mTTF and mTerf5 Have Opposing Roles in Coordination of mtDNA Synthesis

Priit Jõers, Samantha C. Lewis, Atsushi Fukuoh, Mikael Parhiala, Simo Ellilä, Ian J. Holt, Howard T. Jacobs

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003800

Tracking of Chromosome and Replisome Dynamics in Myxococcus xanthus Reveals a Novel Chromosome Arrangement

Andrea Harms, Anke Treuner-Lange, Dominik Schumacher, Lotte Søgaard-Andersen

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003802

Genotype-Environment Interactions Reveal Causal Pathways That Mediate Genetic Effects on Phenotype

Julien Gagneur, Oliver Stegle, Chenchen Zhu, Petra Jakob, Manu M. Tekkedil, Raeka S. Aiyar, Ann-Kathrin Schuon, Dana Pe'er, Lars M. Steinmetz

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003803

N-alpha-terminal Acetylation of Histone H4 Regulates Arginine Methylation and Ribosomal DNA Silencing

Vassia Schiza, Diego Molina-Serrano, Dimitris Kyriakou, Antonia Hadjiantoniou, Antonis Kirmizis

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003805

A Genome-Wide Systematic Analysis Reveals Different and Predictive Proliferation Expression Signatures of Cancerous vs. Non-Cancerous Cells

Yedael Y. Waldman, Tamar Geiger, Eytan Ruppin

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003806

Predicting the Risk of Rheumatoid Arthritis and Its Age of Onset through Modelling Genetic Risk Variants with Smoking

Ian C. Scott, Seth D. Seegobin, Sophia Steer, Rachael Tan, Paola Forabosco, Anne Hinks, Stephen Eyre, Ann W. Morgan, Anthony G. Wilson, Lynne J. Hocking, Paul Wordsworth, Anne Barton, Jane Worthington, Andrew P. Cope, Cathryn M. Lewis

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003808

Phenotypic and Genetic Consequences of Protein Damage

Anita Krisko, Miroslav Radman

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003810

The Molecular Mechanism of a Cis-Regulatory Adaptation in Yeast

Jessica Chang, Yiqi Zhou, Xiaoli Hu, Lucia Lam, Cameron Henry, Erin M. Green, Ryosuke Kita, Michael S. Kobor, Hunter B. Fraser

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003813

dTULP, the Drosophila melanogaster Homolog of Tubby, Regulates Transient Receptor Potential Channel Localization in Cilia

Jina Park, Jeongmi Lee, Jaewon Shim, Woongsu Han, Jinu Lee, Yong Chul Bae, Yun Doo Chung, Chul Hoon Kim, Seok Jun Moon

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003814

Fragile Site Instability in Saccharomyces cerevisiae Causes Loss of Heterozygosity by Mitotic Crossovers and Break-Induced Replication

Danielle M. Rosen, Ellen M. Younkin, Shaylynn D. Miller, Anne M. Casper

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003817

The Genome and Development-Dependent Transcriptomes of Pyronema confluens: A Window into Fungal Evolution

Stefanie Traeger, Florian Altegoer, Michael Freitag, Toni Gabaldon, Frank Kempken, Abhishek Kumar, Marina Marcet-Houben, Stefanie Pöggeler, Jason E. Stajich, Minou Nowrousian

PLOS Genetics: published September 19, 2013 | https://doi.org/10.1371/journal.pgen.1003820

Integration of the Unfolded Protein and Oxidative Stress Responses through SKN-1/Nrf

Kira M. Glover-Cutter, Stephanie Lin, T. Keith Blackwell

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003701

Drosophila Fatty Acid Taste Signals through the PLC Pathway in Sugar-Sensing Neurons

Pavel Masek, Alex C. Keene

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003710

Growth factor independent-1 Maintains Notch1-Dependent Transcriptional Programming of Lymphoid Precursors

James D. Phelan, Ingrid Saba, Hui Zeng, Christian Kosan, Malynda S. Messer, H. Andre Olsson, Jennifer Fraszczak, David A. Hildeman, Bruce J. Aronow, Tarik Möröy, H. Leighton Grimes

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003713

The hedgehog Pathway Gene shifted Functions together with the hmgcr-Dependent Isoprenoid Biosynthetic Pathway to Orchestrate Germ Cell Migration

Girish Deshpande, Keren Zhou, Joy Y. Wan, Jana Friedrich, Nicholas Jourjine, Daniel Smith, Paul Schedl

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003720

Deep Resequencing of GWAS Loci Identifies Rare Variants in CARD9, IL23R and RNF186 That Are Associated with Ulcerative Colitis

Mélissa Beaudoin, Philippe Goyette, Gabrielle Boucher, Ken Sin Lo, Manuel A. Rivas, Christine Stevens, Azadeh Alikashani, Martin Ladouceur, David Ellinghaus, Leif Törkvist, Gautam Goel, Caroline Lagacé, Vito Annese, Alain Bitton, Jakob Begun, Steve R. Brant, Francesca Bresso, Judy H. Cho, Richard H. Duerr, Jonas Halfvarson, Dermot P. B. McGovern, Graham Radford-Smith, Stefan Schreiber, Philip L. Schumm, Yashoda Sharma, Mark S. Silverberg, Rinse K. Weersma, Quebec IBD Genetics Consortium, NIDDK IBD Genetics Consortium, International IBD Genetics Consortium, Mauro D'Amato, Severine Vermeire, Andre Franke, Guillaume Lettre, Ramnik J. Xavier, Mark J. Daly, John D. Rioux

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003723

Extensive Divergence of Transcription Factor Binding in Drosophila Embryos with Highly Conserved Gene Expression

Mathilde Paris, Tommy Kaplan, Xiao Yong Li, Jacqueline E. Villalta, Susan E. Lott, Michael B. Eisen

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003748

Common Variants in Left/Right Asymmetry Genes and Pathways Are Associated with Relative Hand Skill

William M. Brandler, Andrew P. Morris, David M. Evans, Thomas S. Scerri, John P. Kemp, Nicholas J. Timpson, Beate St Pourcain, George Davey Smith, Susan M. Ring, John Stein, Anthony P. Monaco, Joel B. Talcott, Simon E. Fisher, Caleb Webber, Silvia Paracchini

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003751

Genomic Identification of Founding Haplotypes Reveals the History of the Selfing Species Capsella rubella

Yaniv Brandvain, Tanja Slotte, Khaled M. Hazzouri, Stephen I. Wright, Graham Coop

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003754

An Atypical Kinase under Balancing Selection Confers Broad-Spectrum Disease Resistance in Arabidopsis

Carine Huard-Chauveau, Laure Perchepied, Marilyne Debieu, Susana Rivas, Thomas Kroj, Ilona Kars, Joy Bergelson, Fabrice Roux, Dominique Roby

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003766

Regulation of the Boundaries of Accessible Chromatin

Xiaoran Chai, Sanjanaa Nagarajan, Kwoneel Kim, Kibaick Lee, Jung Kyoon Choi

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003778

A Pre-mRNA-Splicing Factor Is Required for RNA-Directed DNA Methylation in Arabidopsis

Chao-Feng Huang, Daisuke Miki, Kai Tang, Hao-Ran Zhou, Zhimin Zheng, Wei Chen, Ze-Yang Ma, Lan Yang, Heng Zhang, Renyi Liu, Xin-Jian He, Jian-Kang Zhu

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003779

Chromatin-Specific Regulation of Mammalian rDNA Transcription by Clustered TTF-I Binding Sites

Sarah D. Diermeier, Attila Németh, Michael Rehli, Ingrid Grummt, Gernot Längst

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003786

The Condition-Dependent Transcriptional Landscape of Burkholderia pseudomallei

Wen Fong Ooi, Catherine Ong, Tannistha Nandi, Jason F. Kreisberg, Hui Hoon Chua, Guangwen Sun, Yahua Chen, Claudia Mueller, Laura Conejero, Majid Eshaghi, Roy Moh Lik Ang, Jianhua Liu, Bruno W. Sobral, Sunee Korbsrisate, Yunn Hwen Gan, Richard W. Titball, Gregory J. Bancroft, Eric Valade, Patrick Tan

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003795

A Link between ORC-Origin Binding Mechanisms and Origin Activation Time Revealed in Budding Yeast

Timothy Hoggard, Erika Shor, Carolin A. Müller, Conrad A. Nieduszynski, Catherine A. Fox

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003798

PAQR-2 Regulates Fatty Acid Desaturation during Cold Adaptation in C. elegans

Emma Svensk, Marcus Ståhlman, Carl-Henrik Andersson, Maja Johansson, Jan Borén, Marc Pilon

PLOS Genetics: published September 12, 2013 | https://doi.org/10.1371/journal.pgen.1003801

Genetic and Anatomical Basis of the Barrier Separating Wakefulness and Anesthetic-Induced Unresponsiveness

William J. Joiner, Eliot B. Friedman, Hsiao-Tung Hung, Kyunghee Koh, Mallory Sowcik, Amita Sehgal, Max B. Kelz

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003605

Ablating Adult Neurogenesis in the Rat Has No Effect on Spatial Processing: Evidence from a Novel Pharmacogenetic Model

James O. Groves, Isla Leslie, Guo-Jen Huang, Stephen B. McHugh, Amy Taylor, Richard Mott, Marcus Munafò, David M. Bannerman, Jonathan Flint

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003718

Environmental Stresses Disrupt Telomere Length Homeostasis

Gal Hagit Romano, Yaniv Harari, Tal Yehuda, Ariel Podhorzer, Linda Rubinstein, Ron Shamir, Assaf Gottlieb, Yael Silberberg, Dana Pe'er, Eytan Ruppin, Roded Sharan, Martin Kupiec

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003721

Genome-Wide Mutation Avalanches Induced in Diploid Yeast Cells by a Base Analog or an APOBEC Deaminase

Artem G. Lada, Elena I. Stepchenkova, Irina S. R. Waisertreiger, Vladimir N. Noskov, Alok Dhar, James D. Eudy, Robert J. Boissy, Masayuki Hirano, Igor B. Rogozin, Youri I. Pavlov

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003736

VAPB/ALS8 MSP Ligands Regulate Striated Muscle Energy Metabolism Critical for Adult Survival in Caenorhabditis elegans

Sung Min Han, Hajer El Oussini, Jelena Scekic-Zahirovic, Jack Vibbert, Pauline Cottee, Jeevan K. Prasain, Hugo J. Bellen, Luc Dupuis, Michael A. Miller

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003738

Genome Analysis of a Transmissible Lineage of Pseudomonas aeruginosa Reveals Pathoadaptive Mutations and Distinct Evolutionary Paths of Hypermutators

Rasmus Lykke Marvig, Helle Krogh Johansen, Søren Molin, Lars Jelsbak

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003741

Type I-E CRISPR-Cas Systems Discriminate Target from Non-Target DNA through Base Pairing-Independent PAM Recognition

Edze R. Westra, Ekaterina Semenova, Kirill A. Datsenko, Ryan N. Jackson, Blake Wiedenheft, Konstantin Severinov, Stan J. J. Brouns

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003742

Bi-modal Distribution of the Second Messenger c-di-GMP Controls Cell Fate and Asymmetry during the Caulobacter Cell Cycle

Sören Abel, Tabitha Bucher, Micaël Nicollier, Isabelle Hug, Volkhard Kaever, Pia Abel zur Wiesch, Urs Jenal

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003744

An Enhancer Element Harboring Variants Associated with Systemic Lupus Erythematosus Engages the TNFAIP3 Promoter to Influence A20 Expression

Shaofeng Wang, Feng Wen, Graham B. Wiley, Michael T. Kinter, Patrick M. Gaffney

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003750

Stochastic Loss of Silencing of the Imprinted Ndn/NDN Allele, in a Mouse Model and Humans with Prader-Willi Syndrome, Has Functional Consequences

Anne Rieusset, Fabienne Schaller, Unga Unmehopa, Valery Matarazzo, Françoise Watrin, Matthias Linke, Beatrice Georges, Jocelyn Bischof, Femke Dijkstra, Monique Bloemsma, Severine Corby, François J. Michel, Rachel Wevrick, Ulrich Zechner, Dick Swaab, Keith Dudley, Laurent Bezin, Françoise Muscatelli

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003752

Divergent Transcriptional Regulatory Logic at the Intersection of Tissue Growth and Developmental Patterning

Matthew Slattery, Roumen Voutev, Lijia Ma, Nicolas Nègre, Kevin P. White, Richard S. Mann

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003753

Functional Dissection of Regulatory Models Using Gene Expression Data of Deletion Mutants

Jin'e Li, Yi Liu, Min Liu, Jing-Dong J. Han

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003757

The Arabidopsis IDD14, IDD15, and IDD16 Cooperatively Regulate Lateral Organ Morphogenesis and Gravitropism by Promoting Auxin Biosynthesis and Transport

Dayong Cui, Jingbo Zhao, Yanjun Jing, Mingzhu Fan, Jing Liu, Zhicai Wang, Wei Xin, Yuxin Hu

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003759

Plasticity Regulators Modulate Specific Root Traits in Discrete Nitrogen Environments

Miriam L. Gifford, Joshua A. Banta, Manpreet S. Katari, Jo Hulsmans, Lisa Chen, Daniela Ristova, Daniel Tranchina, Michael D. Purugganan, Gloria M. Coruzzi, Kenneth D. Birnbaum

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003760

Convergent Transcription Induces Dynamic DNA Methylation at disiRNA Loci

Yunkun Dang, Liande Li, Wei Guo, Zhihong Xue, Yi Liu

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003761

Dynamics of DNA Methylation in Recent Human and Great Ape Evolution

Irene Hernando-Herraez, Javier Prado-Martinez, Paras Garg, Marcos Fernandez-Callejo, Holger Heyn, Christina Hvilsom, Arcadi Navarro, Manel Esteller, Andrew J. Sharp, Tomas Marques-Bonet

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003763

The Uve1 Endonuclease Is Regulated by the White Collar Complex to Protect Cryptococcus neoformans from UV Damage

Surbhi Verma, Alexander Idnurm

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003769

Transmission of Hypervirulence Traits via Sexual Reproduction within and between Lineages of the Human Fungal Pathogen Cryptococcus gattii

Kerstin Voelz, Hansong Ma, Sujal Phadke, Edmond J. Byrnes, Pinkuan Zhu, Olaf Mueller, Rhys A. Farrer, Daniel A. Henk, Yonathan Lewit, Yen-Ping Hsueh, Matthew C. Fisher, Alexander Idnurm, Joseph Heitman, Robin C. May

PLOS Genetics: published September 5, 2013 | https://doi.org/10.1371/journal.pgen.1003771

September 2013

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The blossoming of Capsella rubella.

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**The blossoming of Capsella rubella.**