The DNMT3A ADD domain is required for efficient de novo DNA methylation and maternal imprinting in mouse oocytes

Ryuji Uehara, Wan Kin Au Yeung, Keisuke Toriyama, Hiroaki Ohishi, Naoki Kubo, Hidehiro Toh, Isao Suetake, Kenjiro Shirane, Hiroyuki Sasaki

PLOS Genetics: published August 1, 2023 | https://doi.org/10.1371/journal.pgen.1010855

The bacterial genetic determinants of Escherichia coli capacity to cause bloodstream infections in humans

Judit Burgaya, Julie Marin, Guilhem Royer, Bénédicte Condamine, Benoit Gachet, Olivier Clermont, Françoise Jaureguy, Charles Burdet, Agnès Lefort, Victoire de Lastours, Erick Denamur, Marco Galardini, François Blanquart, Colibafi/Septicoli & Coliville groups

PLOS Genetics: published August 2, 2023 | https://doi.org/10.1371/journal.pgen.1010842

Segregational drift hinders the evolution of antibiotic resistance on polyploid replicons

Ana Garoña, Mario Santer, Nils F. Hülter, Hildegard Uecker, Tal Dagan

PLOS Genetics: published August 3, 2023 | https://doi.org/10.1371/journal.pgen.1010829

Restoration of energy homeostasis under oxidative stress: Duo synergistic AMPK pathways regulating arginine kinases

Nan Zhang, Xiangkun Meng, Heng Jiang, Huichen Ge, Kun Qian, Yang Zheng, Yoonseong Park, Jianjun Wang

PLOS Genetics: published August 3, 2023 | https://doi.org/10.1371/journal.pgen.1010843

Emergence of linkage between cooperative RNA replicators encoding replication and metabolic enzymes through experimental evolution

Kensuke Ueda, Ryo Mizuuchi, Norikazu Ichihashi

PLOS Genetics: published August 4, 2023 | https://doi.org/10.1371/journal.pgen.1010471

Nascent evolution of recombination rate differences as a consequence of chromosomal rearrangements

Karin Näsvall, Jesper Boman, Lars Höök, Roger Vila, Christer Wiklund, Niclas Backström

PLOS Genetics: published August 7, 2023 | https://doi.org/10.1371/journal.pgen.1010717

The RNA-binding protein Adad1 is necessary for germ cell maintenance and meiosis in zebrafish

Kazi Nazrul Islam, Anuoluwapo Ajao, Kavita Venkataramani, Joshua Rivera, Shailja Pathania, Katrin Henke, Kellee Renee Siegfried

PLOS Genetics: published August 8, 2023 | https://doi.org/10.1371/journal.pgen.1010589

Rege-1 promotes C. elegans survival by modulating IIS and TOR pathways

Yi-Ting Tsai, Chen-Hsi Chang, Hsin-Yue Tsai

PLOS Genetics: published August 9, 2023 | https://doi.org/10.1371/journal.pgen.1010869

The Ypk1 protein kinase signaling pathway is rewired and not essential for viability in Candida albicans

Bernardo Ramírez-Zavala, Ines Krüger, Andreas Wollner, Sonja Schwanfelder, Joachim Morschhäuser

PLOS Genetics: published August 10, 2023 | https://doi.org/10.1371/journal.pgen.1010890

Systematic analysis of tup1 and cyc8 mutants reveals distinct roles for TUP1 and CYC8 and offers new insight into the regulation of gene transcription by the yeast Tup1-Cyc8 complex

Brenda Lee, Michael Church, Karsten Hokamp, Mohamed M. Alhussain, Atif A. Bamagoos, Alastair B. Fleming

PLOS Genetics: published August 11, 2023 | https://doi.org/10.1371/journal.pgen.1010876

Matriptase-dependent epidermal pre-neoplasm in zebrafish embryos caused by a combination of hypotonic stress and epithelial polarity defects

Julia Hatzold, Verena Nett, Stephanie Brantsch, Jin-Li Zhang, Joy Armistead, Heike Wessendorf, Rebecca Stephens, Patrick O. Humbert, Sandra Iden, Matthias Hammerschmidt

PLOS Genetics: published August 11, 2023 | https://doi.org/10.1371/journal.pgen.1010873

Drosophila embryos allocate lipid droplets to specific lineages to ensure punctual development and redox homeostasis

Marcus D. Kilwein, T. Kim Dao, Michael A. Welte

PLOS Genetics: published August 14, 2023 | https://doi.org/10.1371/journal.pgen.1010875

Exome sequencing identified rare recurrent copy number variants and hereditary breast cancer susceptibility

Timo A. Kumpula, Sandra Vorimo, Taneli T. Mattila, Luke O’Gorman, Galuh Astuti, Anna Tervasmäki, Susanna Koivuluoma, Tiina M. Mattila, Mervi Grip, Robert Winqvist, Outi Kuismin, Jukka Moilanen, Alexander Hoischen, Christian Gilissen, Tuomo Mantere, Katri Pylkäs

PLOS Genetics: published August 14, 2023 | https://doi.org/10.1371/journal.pgen.1010889

DNA repair function scores for 2172 variants in the BRCA1 amino-terminus

Mariame Diabate, Muhtadi M. Islam, Gregory Nagy, Tapahsama Banerjee, Shruti Dhar, Nahum Smith, Aleksandra I. Adamovich, Lea M. Starita, Jeffrey D. Parvin

PLOS Genetics: published August 14, 2023 | https://doi.org/10.1371/journal.pgen.1010739

Integrating sex-bias into studies of archaic introgression on chromosome X

Elizabeth T. Chevy, Emilia Huerta-Sánchez, Sohini Ramachandran

PLOS Genetics: published August 14, 2023 | https://doi.org/10.1371/journal.pgen.1010399

Multi-ancestry GWAS analysis identifies two novel loci associated with diabetic eye disease and highlights APOL1 as a high risk locus in patients with diabetic macular edema

Amy D. Stockwell, Michael C. Chang, Anubha Mahajan, William Forrest, Neha Anegondi, Rion K. Pendergrass, Suresh Selvaraj, Jens Reeder, Eric Wei, Victor A. Iglesias, Natalie M. Creps, Laura Macri, Andrea N. Neeranjan, Marcel P. van der Brug, Suzie J. Scales, Mark I. McCarthy, Brian L. Yaspan

PLOS Genetics: published August 16, 2023 | https://doi.org/10.1371/journal.pgen.1010609

Functional mapping of N-terminal residues in the yeast proteome uncovers novel determinants for mitochondrial protein import

Salomé Nashed, Houssam El Barbry, Médine Benchouaia, Angélie Dijoux-Maréchal, Thierry Delaveau, Nadia Ruiz-Gutierrez, Lucie Gaulier, Déborah Tribouillard-Tanvier, Guillaume Chevreux, Stéphane Le Crom, Benoit Palancade, Frédéric Devaux, Elodie Laine, Mathilde Garcia

PLOS Genetics: published August 16, 2023 | https://doi.org/10.1371/journal.pgen.1010848

Genomic diversity landscapes in outcrossing and selfing Caenorhabditis nematodes

Anastasia A. Teterina, John H. Willis, Matt Lukac, Richard Jovelin, Asher D. Cutter, Patrick C. Phillips

PLOS Genetics: published August 16, 2023 | https://doi.org/10.1371/journal.pgen.1010879

Regulation of chromatin accessibility and gene expression in the developing hippocampal primordium by LIM-HD transcription factor LHX2

Varun Suresh, Bhavana Muralidharan, Saurabh J. Pradhan, Mahima Bose, Leora D’Souza, Arpan Parichha, Puli Chandramouli Reddy, Sanjeev Galande, Shubha Tole

PLOS Genetics: published August 18, 2023 | https://doi.org/10.1371/journal.pgen.1010874

Beyond a PPR-RNA recognition code: Many aspects matter for the multi-targeting properties of RNA editing factor PPR56

Yingying Yang, Kira Ritzenhofen, Jessica Otrzonsek, Jingchan Xie, Mareike Schallenberg-Rüdinger, Volker Knoop

PLOS Genetics: published August 21, 2023 | https://doi.org/10.1371/journal.pgen.1010733

Muscleblind-1 interacts with tubulin mRNAs to regulate the microtubule cytoskeleton in C. elegans mechanosensory neurons

Dharmendra Puri, Sunanda Sharma, Sarbani Samaddar, Sruthy Ravivarma, Sourav Banerjee, Anindya Ghosh-Roy

PLOS Genetics: published August 21, 2023 | https://doi.org/10.1371/journal.pgen.1010885

Kar4, the yeast homolog of METTL14, is required for mRNA m⁶A methylation and meiosis

Zachory M. Park, Abigail J. Sporer, Katherine Kraft, Krystal K. Lum, Edith Blackman, Ethan Belnap, Christopher M. Yellman, Mark D. Rose

PLOS Genetics: published August 21, 2023 | https://doi.org/10.1371/journal.pgen.1010896

Artificial selection reveals complex genetic architecture of shoot branching and its response to nitrate supply in Arabidopsis

Hugo Tavares, Anne Readshaw, Urszula Kania, Maaike de Jong, Raj K. Pasam, Hayley McCulloch, Sally Ward, Liron Shenhav, Elizabeth Forsyth, Ottoline Leyser

PLOS Genetics: published August 24, 2023 | https://doi.org/10.1371/journal.pgen.1010863

Neutrophil extracellular trap formation and gene programs distinguish TST/IGRA sensitization outcomes among Mycobacterium tuberculosis exposed persons living with HIV

Elouise E. Kroon, Wilian Correa-Macedo, Rachel Evans, Allison Seeger, Lize Engelbrecht, Jurgen A. Kriel, Ben Loos, Naomi Okugbeni, Marianna Orlova, Pauline Cassart, Craig J. Kinnear, Gerard C. Tromp, Marlo Möller, Robert J. Wilkinson, Anna K. Coussens, Erwin Schurr, Eileen G. Hoal

PLOS Genetics: published August 24, 2023 | https://doi.org/10.1371/journal.pgen.1010888

Localization of oskar mRNA by agglomeration in ribonucleoprotein granules

Catherine E. Eichler, Hui Li, Michelle E. Grunberg, Elizabeth R. Gavis

PLOS Genetics: published August 25, 2023 | https://doi.org/10.1371/journal.pgen.1010877

Caenorhabditis elegans models for striated muscle disorders caused by missense variants of human LMNA

Ellen F. Gregory, Shilpi Kalra, Trisha Brock, Gisèle Bonne, G. W. Gant Luxton, Christopher Hopkins, Daniel A. Starr

PLOS Genetics: published August 25, 2023 | https://doi.org/10.1371/journal.pgen.1010895

Kar4 is required for the normal pattern of meiotic gene expression

Zachory M. Park, Matthew Remillard, Ethan Belnap, Mark D. Rose

PLOS Genetics: published August 28, 2023 | https://doi.org/10.1371/journal.pgen.1010898

Genetic enhancers of partial PLK1 inhibition reveal hypersensitivity to kinetochore perturbations

Karine Normandin, Jasmin Coulombe-Huntington, Corinne St-Denis, Alexandre Bernard, Mohammed Bourouh, Thierry Bertomeu, Mike Tyers, Vincent Archambault

PLOS Genetics: published August 28, 2023 | https://doi.org/10.1371/journal.pgen.1010903

MYC disrupts transcriptional and metabolic circadian oscillations in cancer and promotes enhanced biosynthesis

Juliana Cazarin, Rachel E. DeRollo, Siti Noor Ain Binti Ahmad Shahidan, Jamison B. Burchett, Daniel Mwangi, Saikumari Krishnaiah, Annie L. Hsieh, Zandra E. Walton, Rebekah Brooks, Stephano S. Mello, Aalim M. Weljie, Chi V. Dang, Brian J. Altman

PLOS Genetics: published August 28, 2023 | https://doi.org/10.1371/journal.pgen.1010904

Myc-regulated miRNAs modulate p53 expression and impact animal survival under nutrient deprivation

María P. Gervé, Juan A. Sánchez, María C. Ingaramo, Andrés Dekanty

PLOS Genetics: published August 28, 2023 | https://doi.org/10.1371/journal.pgen.1010721

β-Catenin transcriptional activity is required for establishment of inner pillar cell identity during cochlear development

Michael Ebeid, Ippei Kishimoto, Pooja Roy, Mohd Ali Abbas Zaidi, Alan G. Cheng, Sung-Ho Huh

PLOS Genetics: published August 28, 2023 | https://doi.org/10.1371/journal.pgen.1010925

rRNA transcription is integral to phase separation and maintenance of nucleolar structure

Soma Dash, Maureen C. Lamb, Jeffrey J. Lange, Mary C. McKinney, Dai Tsuchiya, Fengli Guo, Xia Zhao, Timothy J. Corbin, MaryEllen Kirkman, Kym Delventhal, Emma L. Moore, Sean McKinney, Rita Shiang, Paul A. Trainor

PLOS Genetics: published August 28, 2023 | https://doi.org/10.1371/journal.pgen.1010854

Rapid evolutionary diversification of the flamenco locus across simulans clade Drosophila species

Sarah Signor, Jeffrey Vedanayagam, Bernard Y. Kim, Filip Wierzbicki, Robert Kofler, Eric C. Lai

PLOS Genetics: published August 29, 2023 | https://doi.org/10.1371/journal.pgen.1010914

Genome-wide fitness profiling reveals molecular mechanisms that bacteria use to interact with Trichoderma atroviride exometabolites

José Manuel Villalobos-Escobedo, Maria Belen Mercado-Esquivias, Catharine Adams, W. Berkeley Kauffman, Rex R. Malmstrom, Adam M. Deutschbauer, N. Louise Glass

PLOS Genetics: published August 31, 2023 | https://doi.org/10.1371/journal.pgen.1010909

Correction: The bZIP transcription factor AREB3 mediates FT signalling and floral transition at the Arabidopsis shoot apical meristem

Damiano Martignago, Vítor da Silveira Falavigna, Alessandra Lombardi, He Gao, Paolo Korwin Krukowski, Massimo Galbiati, Chiara Tonelli, George Coupland, Lucio Conti

PLOS Genetics: published August 29, 2023 | https://doi.org/10.1371/journal.pgen.1010920

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PLOS Genetics: published August 16, 2023 | https://doi.org/10.1371/journal.pgen.1010852