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Characterization of a second secologanin synthase isoform producing both secologanin and secoxyloganin allows enhanced de novo assembly of a Catharanthus roseus transcriptome.

scientific article published on 19 August 2015

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22 February 2020

Characterization of a second secologanin synthase isoform producing both secologanin and secoxyloganin allows enhanced de novo assembly of a Catharanthus roseus transcriptome (English)

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22 February 2020

(-)-secologanin

2 references

ChEBI release 2020-05-28

Catharanthus roseus

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Methyl 2-(hexopyranosyloxy)-4-(2-oxoethyl)-3-vinyl-3,4-dihydro-2H-pyran-5-carboxylate

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4

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22 February 2020

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22 February 2020

Benoit St-Pierre

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22 February 2020

Sarah E. O'Connor

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22 February 2020

Vincent Courdavault

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22 February 2020

Thomas Dugé de Bernonville

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22 February 2020

Nathalie Giglioli-Guivarc'h

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22 February 2020

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22 February 2020

Gaëlle Glévarec

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22 February 2020

Sébastien Besseau

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22 February 2020

Emilien Foureau

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22 February 2020

Monica Arias Londono

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22 February 2020

Benjamin Houillé

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22 February 2020

Lucía Atehortúa

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22 February 2020

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Claire Parage

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22 February 2020

Vincenzo De Luca

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22 February 2020

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22 February 2020

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https://bmcgenomics.biomedcentral.com/track/pdf/10.1186/s12864-015-1678-y

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19 March 2024

https://api.unpaywall.org/v2/10.1186/[email protected]

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22 February 2020

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22 February 2020

1

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619

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22 February 2020

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19 August 2015

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ggplot2

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10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=4541752

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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19 March 2024

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De novo production of the plant-derived alkaloid strictosidine in yeast

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Transcriptome analysis of Catharanthus roseus for gene discovery and expression profiling

1 reference

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1 reference

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7-deoxyloganetic acid synthase catalyzes a key 3 step oxidation to form 7-deoxyloganetic acid in Catharanthus roseus iridoid biosynthesis

1 reference

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SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads.

1 reference

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High-throughput transcriptome analysis of the leafy flower transition of Catharanthus roseus induced by peanut witches'-broom phytoplasma infection

1 reference

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A pair of tabersonine 16-hydroxylases initiates the synthesis of vindoline in an organ-dependent manner in Catharanthus roseus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541752

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A 7-deoxyloganetic acid glucosyltransferase contributes a key step in secologanin biosynthesis in Madagascar periwinkle

1 reference

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Virus-induced gene silencing identifies Catharanthus roseus 7-deoxyloganic acid-7-hydroxylase, a step in iridoid and monoterpene indole alkaloid biosynthesis.

1 reference

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ATP-binding cassette transporter controls leaf surface secretion of anticancer drug components in Catharanthus roseus

1 reference

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Geraniol hydroxylase and hydroxygeraniol oxidase activities of the CYP76 family of cytochrome P450 enzymes and potential for engineering the early steps of the (seco)iridoid pathway

1 reference

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1 reference

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CathaCyc, a metabolic pathway database built from Catharanthus roseus RNA-Seq data

1 reference

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1 reference

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SRAdb: query and use public next-generation sequencing data from within R.

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1 reference

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1 reference

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Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels

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Homolog of tocopherol C methyltransferases catalyzes N methylation in anticancer alkaloid biosynthesis

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A Cytochrome P-450 Monooxygenase Catalyzes the First Step in the Conversion of Tabersonine to Vindoline in Catharanthus roseus

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Indole alkaloid biosynthesis in Catharanthus roseus: new enzyme activities and identification of cytochrome P450 CYP72A1 as secologanin synthase

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Molecular cloning and analysis of strictosidine beta-D-glucosidase, an enzyme in terpenoid indole alkaloid biosynthesis in Catharanthus roseus.

1 reference

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1 reference

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1 reference

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Developmental Regulation of Enzymes of Indole Alkaloid Biosynthesis in Catharanthus roseus.

1 reference

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25 September 2018

Subcellular Localization of Enzymes Involved in Indole Alkaloid Biosynthesis in Catharanthus roseus.

1 reference

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Co-expression of three MEP pathway genes and geraniol 10-hydroxylase in internal phloem parenchyma of Catharanthus roseus implicates multicellular translocation of intermediates during the biosynthesis of monoterpene indole alkaloids and isoprenoid-

1 reference

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Light-induced cytochrome P450-dependent enzyme in indole alkaloid biosynthesis: tabersonine 16-hydroxylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541752

25 September 2018

The terminal O-acetyltransferase involved in vindoline biosynthesis defines a new class of proteins responsible for coenzyme A-dependent acyl transfer

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541752

25 September 2018

Kinetic studies on bovine cytochrome p45011 beta catalyzing successive reactions from deoxycorticosterone to aldosterone

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541752

25 September 2018

Theoretical kinetics of sequential metabolism in vitro. Study of the formation of 16 alpha-hydroxyandrostenedione from testosterone by purified rat P450 2C11.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4541752

25 September 2018

Discovery of a P450-catalyzed step in vindoline biosynthesis: a link between the aspidosperma and eburnamine alkaloids

1 reference

https://pubmed.ncbi.nlm.nih.gov/26285573

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/S12864-015-1678-Y

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26285573%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26285573%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26285573%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

ResearchGate publication ID

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