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KEGG   Arvicanthis niloticus (African grass rat): 117703376
Entry
117703376         CDS       T08817                                 
Symbol
Nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
  KO
K14317  nuclear pore complex protein Nup214
Organism
anu  Arvicanthis niloticus (African grass rat)
Pathway
anu03013  Nucleocytoplasmic transport
anu05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:anu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    117703376 (Nup214)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    117703376 (Nup214)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:anu03019]
    117703376 (Nup214)
Messenger RNA biogenesis [BR:anu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     117703376 (Nup214)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 117703376
NCBI-ProteinID: XP_034350828
LinkDB
Position
2:9139257..9229353
AA seq 2074 aa
MGDEMDALIPEREMKDFQFRALKKVRIFDAPEELPKERSSVLTISNKYGMLFAAGTNGLN
VFPTKSLLIQNKPGDDPNKIVDTIQGLNVPMKFPVHHLALSCDNLTLSACMMSSEYGSII
AFFDVRTFSNQAKPLKRPFTYHKLSNDASGMVNDMKWNPTVPSMVAVCLADGSISVLQVT
DVVKVCATLPPSTGVTCVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHP
VRVLDVLWIGTYVFTIVYAGADGTLETCPDVVMALLPKKEEKHPEVFVNFMEPCYSSCTE
RQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQTNWESWLLEDSSRAELPVTDKSDDS
LPMGVAIDYTNEVEVAINEEKTLPPAPVLLLLSTDGVLCPFYMINQNPGVRSLMKTLELV
STEGERQPKSSGGFPSTPPSPQAPQNLEAPTAASSPLTPVSAAPTATFPLPSAGGGPSVF
SFGPSSFKSSASVTGEPPPYPTGSDSSRAAPGSGTPTFSFAPPSKGSLVPTPAVAPVATS
AAPFTFGSSGFKPTLESTPMSSTPNTGMKPSFPPSASSVKVNLNEKFTAVASSTPAHSST
STPSVLPFSSSPKSPASGPLSHPTPLPASSSSTPLKSSVSPSPSAGRSTQTAPSSAPSTG
QKSPRVNAPVPKAGSSQAKALQPPVTEKQRHQWKDSDPVMAGIGEEIAHFQKELEELKTR
TSKACFQVGTSEEMKMLRTESDDLHTFLFEIREATESLHGDISTLKTTLLEGFAGVEEAR
EQHGRNHDSGYLHLLYKRPLDPKSEAQLQEIRRLHQYVKFAVQDVNDVLDLEWDRHLEQK
KRQRRLIVPERETLFNTLANNREIINQQRKRLNHLVDSLQQLRLYNQTSPWNLPSTLSTQ
SNIHSFDSDLERLLKTTIESHTKPSPRVPGKLSPAKQAQLRNFLAKRKTPPVRSTAPASL
SRSAFLSQRYYEDLDEGSSASSVVHPLEGEDARPTSKEEEAVVPVPRHAPVVRTPSIQPS
LLPQAMPFAKPHLIHSSSPAVMSSSVSTSATKVIPQGADSTMLATKTVKHGAPGPSHTVA
APQAAAAAAALRRQMANQAPAVSTLSESTLKNVPQVVNVQELKSNPSPPSVAMGSSMPHS
AAKTPHAVLAPVAASQAKQGSLMNSFKPSGPTAASCQLSSGDKAVGPGTAKTESAVTSTP
SASGQLNKPFSFASPGTFTFGTVIPTPSSSFTAAPGAAPPTKESNQLEAFSFGGGGKPFC
ETIPGNSPATGATSAPSTSVATASLEDSAPSSSKPAAPSETTMSTASSKLETPPSKLGEL
LFPSSLAGETLGSFSGLRVGQAEDSTKPVSKASSTNLAGAQPAKPSGFSFPSASVLGKPM
EPPVASSVSPAPAAPASALNASTSSSSATVFGSAPLTGAGPSGLVGFGGTSLASSKASFS
FGNQQTSSTALPTTPASTSVAPSLPTSFPTLSFGGLLSSTSASSLPVSSGKSTEEATPPA
VPDKSDHSEVSASAPLLPVQQQSPQLPQASLQTADPVKKEPVPVQTTDSSPSRPASSASL
TASTESTPVAPGGPDSKTEAVSPASTFAGPGQAAVAAAVLPGAGSAASEALGTPGTSSTV
SSSTPTSATETAVFGTVTSGSSVFTQPPAASSSSAFNQLSSNTATAPSATPVFGQVAAST
ATATPQASSSGFGSPAFGASAPGVFGQTAFGQSPAFGQATSSPASGFSFSQPGFSSVPAF
GQSVSSTPTSTSANVFGATSSTSSPGSFSFGQASSNTGGSLFGQNNPPAFGQSPGFGQGG
SVFGGTSATTSTAAPSGFSFCQASGFGSSNTGSVFGQAASSGGSVFGQQSSTSSGSVFGS
GNATRGGGFFSGLGGKPSQDAASKNPFSSASGGFGSTATPNTSNLFGNSGAKTFGGFGSS
SFGEQKPAGTFSSGGGSVASQGFGFSTPNKTGGFGAAPVFGSPPTFGGSPGFGGVPAFGS
APAFTSPLGSTGGKVFGEGTAAASAGGFGFGSSGNTASFGTLASQNAPTFGSLSQQTSGF
GTPSSGFSGFGSGTGAFTFGSSNSSVQGFGGWRS
NT seq 6225 nt   +upstreamnt  +downstreamnt
atgggagacgagatggatgccctgatccctgagcgggagatgaaggactttcagtttaga
gcactgaagaaagtgaggatctttgacgctcctgaagagttgcccaaggagcgctcgagt
gtgcttaccatatccaataagtatggtatgctctttgctgctggcaccaatggcttgaat
gtttttcctactaaaagccttcttatccaaaacaaacctggagatgatcccaataaaatt
gttgacacaatccagggcttgaatgttcctatgaaattcccagtacatcatctggcactg
agctgtgataaccttacactctctgcgtgcatgatgtctagtgaatatggctccattata
gctttttttgatgttcgcacattttcaaatcaggctaaaccactgaaacgcccatttacc
tatcacaagctttcaaatgatgccagcgggatggtgaatgatatgaagtggaaccccact
gtcccttccatggtggcagtttgtcttgctgatggcagtatttctgtcttgcaagttaca
gatgtggtgaaagtgtgtgccacgcttcctccttcaacgggagtcacatgtgtatgctgg
agccccaaaggaaagcagctggcagtcggaaagcagaatggaactgtggtccagtatctt
cctactttgcaggaaaaaaaggtcattccatgtcctccgttttatgagtcagatcaccct
gtcagagttctggatgtgctgtggattggtacatatgtcttcacgatagtctatgctggc
gcagatgggaccttggagacctgtccagatgtggtgatggctctactcccgaaaaaagaa
gaaaagcacccagaagtatttgtgaacttcatggagccctgctacagcagctgcacagag
cgacaacatcattactacctcagctatatcgaggagtgggatttagtgttggcagcatct
gcagcttcaacagaagttagcatccttgctcgacaaagtgatcagactaattgggaatct
tggctactggaggactctagtcgagccgaactgcctgtgacagacaagagtgatgactcc
ttgcccatgggtgttgccatagattataccaatgaagtagaagtcgccatcaatgaagaa
aagactcttcctcctgctccggttctcctgttactttcaacagatggtgtgctttgtcca
ttttatatgatcaatcagaatcctggggttaggtccctgatgaagaccttggagctggtc
tccacagaaggagagcgacagcctaagtcctcaggaggttttcctagcactccaccttcc
cctcaagctccacagaacctcgaagctccaaccgcagcctcttcgcctcttacccctgtg
tccgctgctcccaccgccaccttccctttgccctctgctggaggaggcccttctgtgttc
tcctttggcccttcatccttcaagtcctctgcttctgtcaccggggagcctccaccatac
cccactggctctgacagctcccgagcagcccccggctctggcacccccaccttctcattt
gctcctccttccaaaggctccctggtccccacccctgcagtggctcctgtggccacatcc
gctgctcccttcactttcggatcatcaggttttaaacccaccctggaaagcacacctatg
tccagtaccccaaacacagggatgaagccttcgttcccaccttcagcttcttcggtgaaa
gtcaacctgaatgagaagttcaccgctgtggcctcctctacacctgctcatagctccact
agcacaccctctgtgttgccgttctcttcctcccccaagtcacctgcttctggaccactc
agccatcccacacctctcccagcatcatccagctccacgcctttgaagtcttcagtctct
ccctcgccatcagctggccgatccactcagactgcaccaagttcagcgccctccacgggg
cagaaatcacccagggtaaacgctccagtgccaaaggcaggttcttctcaggccaaggca
cttcagcctcctgtcacagagaaacagaggcatcagtggaaagattcagaccctgtgatg
gctggaattggagaggaaattgcacacttccagaaggaactagaggagttaaagacccgg
acctccaaagcctgtttccaggttggcacctcagaagagatgaagatgcttcggacagag
tcagatgacttgcacaccttcctttttgagattagagaggccacagagtctcttcatgga
gacataagtaccctgaaaacaactttgctggagggctttgctggtgtcgaagaagccaga
gaacagcatggaagaaatcatgattctgggtatctccacctgctttataaaagaccgctg
gatcccaagagcgaggcccaactccaggaaatccgccgccttcaccagtatgtaaaattt
gctgtccaggatgtgaatgacgttctagacttagaatgggatcggcatctggagcagaag
aagagacagaggcgcctaattgtgccagaacgagagacacttttcaacacactagccaac
aaccgggaaatcatcaaccagcagaggaagaggttgaatcacctggtggacagtctgcag
cagcttcgtctctacaaccagacgtccccatggaacctgccctcaacgctttcaactcag
agcaacattcatagttttgacagtgaccttgaacgcctgctaaaaactaccattgaatct
cataccaagccttctcccagagtgccaggtaaactgtccccagcaaaacaggcccaactg
aggaacttcttggccaaaaggaagaccccaccagtgaggtccactgctccagccagcctg
tctcggtcagccttcctgtctcagaggtactatgaagacttagatgaaggcagctccgcg
tcatccgtagttcaccctctggagggagaagatgcccggccaaccagcaaagaggaagag
gctgtggtcccagtccctcggcatgcccctgtggtccgcacaccttctatccagcccagt
ctcctgcctcaggcgatgccttttgcaaagcctcacctgattcatagttcttcacctgct
gtgatgagctcttcagtctctacgtcagccaccaaagttattcctcaaggagccgacagc
acaatgctggcaactaaaacggtaaagcatggtgcaccaggtccttcccacactgtcgca
gctccccaggcggcagcagctgctgcagccctgagacggcagatggccaatcaggcgcca
gctgtgagcactctgtcagaatcaactttgaagaatgtccctcaagtggtgaatgtacag
gaactgaagagtaatccctcgcccccttctgtggccatgggttcttcgatgccccactca
gcagccaaaaccccccatgcagtgttagcccccgtggctgccagccaagccaagcagggg
tctctgatgaattccttcaagccatcaggacccacagcagcatcctgtcagctgtcctct
ggggataaagctgtaggtccagggacagccaagacagagtcagctgtgacctcaactcca
tctgcttcgggccagctcaacaagcctttctcgttcgcctccccagggacctttactttt
gggacagtcataccaaccccatcttctagtttcactgctgcaccaggggcagcacccccc
actaaagagtcaaaccagcttgaggcattctcctttggtgggggaggtaaacctttttgt
gaaaccattcctggaaactcccctgccacaggagccacatcagcacccagcacttctgta
gcaactgcctctctggaagactctgctccgtccagcagcaaacctgcagctccttctgaa
actactatgtccactgcctctagcaagttggaaactccgccatccaagttaggagagctt
ctgttcccaagttctctagctggagagaccctagggagcttctcgggactgcgtgttggc
caagctgaggattctacaaagccagttagtaaggcctcctccacaaatctagccggagcc
cagccagccaagccctcggggtttagctttcctagtgcttcagtgttaggaaagccaatg
gagccgcctgtggcatcctctgttagccctgccccagcagcaccagcctcagctctgaat
gcaagcactagcagttcctcggcaactgtctttggcagtgcaccccttaccggtgctgga
ccttccgggctcgttggctttggtgggacctctttggctagtagcaaagctagtttctca
tttggaaaccaacagactagtagtacagctttacccactaccccagcgtcaacctcggtt
gccccttcccttccgacatctttccctactttgtcgtttggtggcctcttgagttcaaca
tcagcttcttccctgcccgtgtcctctggtaagagcacagaggaggccacaccaccagct
gtacctgacaagtcagaccacagtgaagtttcagcatcagcccccttactcccagtacag
caacagtcaccccagcttccccaggcatctctgcaaactgctgaccctgtcaaaaaagaa
cctgttcctgtgcagaccacagacagcagcccaagcagaccagcctcttctgccagcctt
acagcatccacagagtccactccagtagccccggggggccctgacagcaagacagaggca
gtgtctcctgcttccacctttgcagggcctgggcaggctgctgtggcagcagctgttctc
ccaggagcaggctcggcagccagcgaagcattgggtacccctggcacctccagcactgtc
tccagcagtaccccaacttctgccacagagacagctgtatttgggactgtcacttctggc
tcctcagtctttacacagccacctgctgccagttctagctcagcgttcaaccagctctcc
agtaacacagccactgcgccctctgccacccctgtatttgggcaagtggcagccagcaca
gccactgccacaccacaggccagcagttcaggatttggcagccctgcatttggtgcttca
gctcctggagtgtttggacagacagcatttggacagtccccggcctttgggcaagcaaca
agcagccctgctagtggtttctccttcagccagcctgggttcagctccgtgcctgctttc
ggccagtctgtctcctctactcccacatccaccagtgcaaatgtcttcggagccacctcg
agtaccagcagccctggttccttctcatttggacaggcttctagcaatacaggagggtcg
ctgtttggccaaaacaaccctcctgcttttggtcagagccctggctttgggcagggaggc
tctgtgtttggtggcacctcggccactacctctacagcagcaccttcagggtttagcttt
tgtcaagcctcaggttttgggtctagtaatactggttctgtgtttggtcaagcagccagt
agtggtggatcagtctttggccagcagtcatctacttccagtggcagcgtgtttgggtct
ggaaatgctacaagagggggcggcttcttcagtggccttggaggaaaacccagccaggat
gctgccagcaaaaacccgttcagctcggccagtgggggctttggatcgacagctaccccg
aatacctctaatctgtttggaaacagcggagctaagacatttggagggtttggcagctca
tcctttggggaacagaagcctgctggcacattcagctctggcggtgggagtgtggcatcc
caaggttttggattttccactccaaataaaacaggtggcttcggtgctgctccagtgttt
ggcagccctcctacttttgggggatcccctgggtttggaggggtgccagcattcggttca
gccccagcctttacaagccctctgggctcgacgggaggcaaagtgttcggagagggtact
gcggctgccagcgcaggaggattcgggttcgggagcagtggcaacactgcgtccttcggt
accctcgccagtcagaacgcacccacttttgggtccttgtcccagcagacttcgggcttc
gggaccccgagcagtggattctctgggtttggatcaggcacaggagcgttcacctttgga
tcatctaactcgtctgtccagggctttggtggctggagaagctga

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