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KEGG   Cynara cardunculus var. scolymus (artichoke): 112520458
Entry
112520458         CDS       T05604                                 
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
  KO
K14317  nuclear pore complex protein Nup214
Organism
ccav  Cynara cardunculus var. scolymus (artichoke)
Pathway
ccav03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ccav00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    112520458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccav03019]
    112520458
Messenger RNA biogenesis [BR:ccav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     112520458
SSDB
Motif
Pfam: ANAPC4_WD40
Other DBs
NCBI-GeneID: 112520458
NCBI-ProteinID: XP_024984623
LinkDB
Position
LG 10:22482160..22507771
AA seq 1928 aa
MAETETPDGKNVIKIEEEIEGDLICTKNYRFSRIGEPVPIKSDADFKFDEESVPRRPLAV
SEKFGVIFVAHPSGFCVARTKDVMDTAKELKNGGNGSCIQELGVADVPLGKVSILALSPN
SSMLAASVEHNLYFFSVAGLLNKDHEPSFSKSPNGSSCIKDMQWSTHLEDQYVVLTTDGN
LYRGAGQDVLSNLMDNVDAVNWSMNGKFLAVAKYEYVIILSSKFEEKSRIKLSFDSLLGD
SDANCVVKVDCVRWVRPNCLILGCYCQSPDGKEDNYLLQFITVKDGKITNPSSNPVALTF
CDAFLTINDDYIPFGNGPYMLVNYLDECDVAFATHRKSTDQHIVLFGWSSDEKNEAKMIE
ISDDAWLPTISLQDNSDDNLILGFAVNKAYQDDNIRFVLGEEDTEVSPCCVLLCLTLDGK
LFMFHFASATGPSVLSEDVISVSDEEEVSSSLGSQQRIDICNEETQIGDQALNELQPQKV
KMNESSFKTGYEAHMRSGDEQTKSTAFPKLLLGGTQQDVPVARLNDSRDEARSLPSQKQD
SDFVATLFKASEPVNPEAVKDLKRFEDQEVARVKSSADSVSNSAHDKSDSKHFGVSLEDI
SASRKLPVNKESTGFHGSSGSFSSGSVFSSNIFGVQSSSSSHAGVQGSAQQDLPFARLND
GRDNGQSLSSQKHYGNSDVALIKASEPVNPGAAKDLKRFENQEVAGVKSSAASISKSAND
KSDDTLFGASFEDRRASREFSVNKASTGLDGSSGSFSSGSVFSSNTFGMQSFSSPHAGVQ
GSAELSGKPGSTNLHVPSGSFSSGGIFSSKTFDVKSPLAPHAAVQGNRHDTSAGVAQFSS
GPQKISFPKMISGPSTSSNLLGQGASTGAGFTLPVVSNVQPILGKSSAFEFSDKGNQRSH
TPPRLLSSEPNLSEQRSFIQVEEMAKELDALLNSIEGPGGFYDASVAAHKPSVTALEEGI
WVLSDKCRKWINTMDRGIGEVQLLLDKTVQVLARKIYMEAIVKQATDSQYLDIWNRQKLN
SELDMKRKHILEINQNLTNQLIELERHLNTLELQRFGDNRSDVLMNRRSSHTKHGPPRHI
QSLHSLHNTMNAQLAAAEKLSECLSKQMAVLSIETEPVKNQNVKKELFDTIGISYDDTTF
SSPGQEKSREILLKSKVLVPSCSTAANTNLKKSQQGAVKSSEPETARRRRDSLDRNWASI
EPPKTTVKRILLQEDRQMSPGRLSLPTGPLKLNHQLSEGSMVSHDIPRGVLNISQSKGSQ
DVQIKRHFEGQSNSSLWDSSRSDSSKTPAASVLSLGSGSKTMPIISQDAARNLNFTLKSD
PVVVNNPKFSQQLQSFPEASSNSTGSLAKNIFQKKSIEFSESSNKDTVKSKFAVGNGNQR
PIVAESSSIWSRKSQESPFSAVSSAGSGTAFSGRSFSLEASTRESQVGEAVSSSIASLPV
PVTSAPTSFVFKDAIPSTISAISLSKSSTNFGIKLGATSTLPLSGSSASFPSFPSTPSFG
ATREPMISSSIEPLANVELNTSKLELSKSNLDTSEISTPHVVSMPKFDLKPDVKSSAQTS
PPQPVLSSGAPDMKLGFSVPSEPTTRREPSTIFFSGSQLNLSATNSPVLASNSKAEQPAV
APALSSSPAISNPVEEVGKENDNSDVALTQEDEMEEEAPDTTQIILGNLGGFGLGSAPNP
GAPKQNPFGAPFGNAAANTPITSFTSPSTGGLFRPASFNIASSQPSQPSQQTNFGGFSSG
FGSNNNQSNTGLGFGSNNNQSNTGQGFGQPARIGSGQQALGSVLGSFGQSRQFGAGLPGS
VASPSPFGSGFGGSQTAGGFATASSSGGFANLASGGGGFGSLATSGGGFAAAPTGGGFAA
APTGGGGFAAAATGSVGFGGAPAGGGFAGAAPGGFGAFGSQGGSGFSAFGSTGGTGRPPS
ELFTQMRR
NT seq 5787 nt   +upstreamnt  +downstreamnt
atggcggaaaccgaaactcctgatggtaaaaatgtcatcaaaatcgaggaagaaattgaa
ggagacctaatttgcaccaaaaactaccggttcagcagaatcggagagcccgttcccatc
aaatccgatgccgatttcaaattcgacgaggaaagcgttccgcgtcgtccgttggcagtt
tcggaaaagtttggagtcatttttgttgcgcatccatccgggttttgtgttgcaaggacc
aaagatgttatggacacagcgaaagagttgaaaaatggaggtaatggttcttgtatacag
gagctgggtgttgcggatgttcctcttggaaaggtttccatacttgcattgtctccaaac
tcttccatgcttgccgcctctgttgaacacaacctttattttttctcagttgccggtctt
cttaataaggatcatgaaccatctttctccaaatcacccaatggctcaagttgcatcaag
gacatgcagtggagtacacatttggaggaccagtatgttgttcttacaaccgatggaaat
ctctatcgtggagctggccaagacgttcttagtaatttaatggacaatgtcgatgcggtt
aactggagcatgaatggaaaatttcttgccgtggcaaaatatgaatatgtaatcatttta
tcttcaaaatttgaagagaagtcacggataaaactctcatttgattcactgctaggtgat
tccgatgccaattgcgttgtaaaagtggattgtgtcaggtgggttcgcccaaattgtctt
atcttaggatgttattgtcagagtcccgatgggaaggaagataactatctacttcaattc
attaccgtcaaagatggaaaaattaccaatccctcttccaatccagtggcattgaccttt
tgtgatgctttccttactataaatgacgattacattccgtttggaaatggaccttatatg
ctcgtgaattacttggatgaatgtgatgttgcatttgctactcataggaagagcacggat
caacatattgttctatttggttggtcatcagatgagaagaatgaagctaaaatgatagaa
atctcggatgatgcgtggctgccaacaattagtcttcaagataacagtgatgataatctg
atcctggggtttgctgtcaacaaagcttaccaggatgacaatattagatttgtgctcggc
gaagaagatacagaagtttcaccgtgttgtgttcttctgtgccttacccttgatggaaaa
ctttttatgtttcattttgccagcgccacaggcccttcagttctatccgaggatgtaatt
tctgtttctgatgaggaagaggtgtcttcttcccttggttctcagcagcggattgatatt
tgtaacgaggagacgcaaattggggatcaggcgcttaatgaattacagcctcagaaagta
aaaatgaatgaatcaagttttaaaacaggctatgaggctcatatgaggagcggagacgaa
cagacgaagtctacggcatttccaaagctattattaggtggtacacaacaagatgttcct
gttgcaaggctaaatgatagcagagatgaagcgaggtcacttccttctcagaagcaagat
agcgattttgtggcgacactgtttaaagcatctgagcctgtaaatcctgaagcagttaaa
gatctgaagaggtttgaagatcaagaagttgctagagttaaatcaagtgctgattctgtt
tcaaattctgcacatgataaatcagacagtaaacattttggagtttcccttgaagatatc
agcgcgagtagaaaattgccggtcaataaagaatccactggttttcatggttcctctgga
tctttctcaagtggatcggtgttttcttcaaatatttttggggtgcaatcttcctcctca
tctcatgctggtgttcaagggagtgcacaacaagatcttccatttgcaaggctgaatgat
ggtagagataacgggcagtcactttcttcacagaagcattatggcaattctgacgtggca
ctaattaaagcatctgagcccgtaaatcctggagcagctaaagatctgaaaaggtttgaa
aatcaagaagttgctggagttaaatcaagtgctgcttctatttcaaaatctgcaaatgat
aaatctgacgacacactttttggagcttctttcgaagatcgcagggcaagtagagaattt
tcggtcaataaagcatcaactggtttggatggttcatctggatctttttcaagtggatca
gttttttcttcaaatacatttgggatgcaatctttctcttcacctcatgctggtgtccaa
gggagtgcagaattgtcagggaaaccaggatcgactaatctgcatgttccatctggatca
ttttctagtggaggcatattttcttcgaaaacgtttgatgtgaagtctcctctagcacct
catgctgctgtccaaggaaatcgacatgataccagtgcaggagtcgcacaattttcttct
ggtcctcagaaaatttcatttcccaagatgatttctggtccatcgacttcgagcaatctg
cttggccagggagcttcaactggagctgggtttacattgcctgttgtttctaatgtacaa
cctattcttggaaaatcttctgcctttgaattttctgacaagggaaatcaaagaagtcac
actccgccaaggctattaagttctgaaccaaatctatcagaacaacgcagttttatccag
gttgaagagatggcgaaagagctagatgcactgttgaattctatagaaggaccaggtggt
ttctatgatgcctctgttgctgctcataaaccttctgttacggcactggaagaaggcatt
tgggtactttctgacaaatgccgaaagtggataaacacaatggatcgaggaattggagag
gttcagcttcttcttgataagacggttcaagttttggcaaggaaaatatatatggaagca
attgtcaagcaggcgactgatagtcaatacttggatatttggaatcgccagaagctgaat
tctgaactggatatgaagcgtaaacatatattagagataaatcagaatctgacaaaccag
ctaatagaacttgagaggcatttaaacaccctcgagctacaaaggtttggtgataataga
agtgatgtcctaatgaatcgtagatcttcccatacaaaacatggtccaccgaggcacatt
caatctctgcacagtttacacaacacaatgaatgcacagctagcagctgcagagaaactt
tccgaatgtctttcgaagcaaatggctgtgcttagtatagagacggaaccggtgaaaaat
cagaatgtgaaaaaggagttgtttgacacaattggaatctcttatgatgataccactttc
agttctccaggtcaagaaaaatccagggagatcctgctaaaaagtaaagttctagttcct
tcatgttcaactgctgccaataccaatctgaagaaaagccaacaaggtgctgtaaagagt
tctgaaccagaaactgctagaaggcgcagagactcgcttgataggaattgggctagtatt
gaacctccgaaaacgactgtaaagaggatacttttgcaagaggaccgtcagatgagtcct
ggccgattatctttaccaactggcccactaaaacttaatcatcagttgtctgagggttca
atggtttctcatgatattccacgtggtgtcttaaatatttcccaaagcaaaggcagccag
gatgtacagataaagcggcattttgagggacagtcgaattcttcactttgggatagtagt
cgttcagattcatcaaaaactcctgcagcgtctgtgctttccttaggttctggttccaag
acaatgcctatcataagtcaagatgctgcaagaaacttaaactttaccttaaagtctgat
cctgtggtagtcaacaacccaaaatttagtcaacaattgcaaagtttcccagaagcttca
tctaattccacagggtcactggcgaagaatatattccagaagaaatctatcgagttttca
gaatccagtaataaagataccgtaaaatcaaaatttgcagttgggaatgggaaccagagg
cctatagtggcagaaagctcttctatttggtccaggaagagtcaggaatctccattttct
gctgtgtcgagtgctggctcaggtactgccttctctggaagaagtttctctctggaggca
tctacaagagaaagtcaggttggtgaagctgtgtcgtcttctattgcatcattgcctgtt
ccagttacttccgcacctacatcctttgtgtttaaagatgctatcccgtccacaatttct
gctatatcactcagtaaatcatcaaccaattttgggatcaagttgggtgctacttcgacc
ctcccactatctggatcttcagcttcttttccctcatttccatctaccccctcttttggg
gctactagagaaccgatgatttcttcctccattgaacccttggcgaacgtagaattaaac
acttccaagttggagctctccaaatcgaatctagatacgagtgagatttctacgcctcat
gtagtttcaatgccaaagtttgacttgaaaccagatgtgaaatcttctgctcaaacttca
cctccccagcctgtgctttcctcaggtgctcctgatatgaaacttggattctcagttcca
tcagaacctacaactagaagagaaccatcaaccatttttttttctggaagtcagctcaac
ttaagcgctacaaatagtcctgtactagcgtcaaattctaaagcagaacaaccagcggta
gcacctgctctatcctcctcaccagccatttcaaatccagtggaagaagttggtaaagag
aatgacaattcagatgtcgcacttacccaggaggatgagatggaggaagaggctcctgat
accactcaaattatattgggaaaccttggtgggtttgggcttgggtcagccccaaatcct
ggtgcacccaagcagaatccgtttggtgcaccatttggtaatgcagcagcaaatacacca
atcacttcttttacttctccatcaactggtggtttgtttagacctgcatcctttaacatt
gcatcttcacaaccttcccaaccatctcagcagacaaattttggtggcttctctagtggc
tttggcagtaacaacaatcaaagtaatactggcctagggtttggcagtaataacaatcaa
agtaatactggacaagggtttggacagcctgctcggataggatctggtcaacaggctcta
gggtcggttcttggttcttttggacagtcgagacagtttggtgctggtctacctggaagt
gttgcttctccaagtccatttggcagtggttttggtggcagtcaaactgctggtggtttc
gctactgcttcctcaagtggtgggtttgctaatctggcttcaggaggtggaggctttggt
agtttagccacaagtggtggtggatttgccgctgcacccactggtggtggatttgccgct
gcacccactggtggtggtggatttgctgctgcagctacaggtagcgttggatttggtggt
gctccagctggtggtggatttgctggtgctgctcctggtgggtttggagcatttggcagt
caaggaggaagtggcttctctgcatttggtagtactggaggaacgggaagacctccatca
gagctcttcacacagatgaggagatag

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