Svoboda
|
Graniru
|
BBC Russia
|
Golosameriki
|
Facebook
Camelus dromedarius (Arabian camel): 105106936
Help
Entry
105106936 CDS
T04642
Symbol
RIMS1
Name
(RefSeq) LOW QUALITY PROTEIN: regulating synaptic membrane exocytosis protein 1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
cdk
Camelus dromedarius (Arabian camel)
Pathway
cdk04721
Synaptic vesicle cycle
cdk04723
Retrograde endocannabinoid signaling
Brite
KEGG Orthology (KO) [BR:
cdk00001
]
09150 Organismal Systems
09156 Nervous system
04723 Retrograde endocannabinoid signaling
105106936 (RIMS1)
04721 Synaptic vesicle cycle
105106936 (RIMS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cdk04131
]
105106936 (RIMS1)
Membrane trafficking [BR:
cdk04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
105106936 (RIMS1)
Small GTPases and associated proteins
Rab associated proteins
105106936 (RIMS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
FYVE_2
PDZ_6
Nudix_N_2
Motif
Other DBs
NCBI-GeneID:
105106936
NCBI-ProteinID:
XP_031311773
LinkDB
All DBs
Position
8:complement(2066133..2515981)
Genome browser
AA seq
1580 aa
AA seq
DB search
MLKCVVRDMVKPAACKTPRNAEHQPHQPPPRLHQQFESYKEQVRKIGEEARRYQGEHKDD
APTCGICHKTKFADGCGHLCSYCRTKFCARCGGRVSLRSNNEDKVVMWVCNLCRKQQEIL
TKSGAWFFGSGPQQPSQDGTLSDTATGPGSEVPREKRARLQERSRSQTPLSTAATPSQEP
AAPSAQPDRSKGAEPSQPVVGPEQKQASSRSRSEPPRERKKTPGLSEPNGKGAPKSERKR
APKPSAQPGEGAAEERERKERRESRRLEKGRSQDYPDVSEKREAGPAAEDEKQRKEEEYQ
TRYRSDPNLARYPVKPPPREMQLRMHARVSRARRAGKETGTXAEGGGEEGRQGWRQAGRG
TPPGSPPVAAGYSEEGTGEGGDPAPGRSPNTAAAPGPGAPADAAEPRAPEPLRKQSRLDP
GAAVLVRKAKREKVETLLRNDSLSSDQSESVRPSPPKPHRAKRGGKKRQMSVSSSEEEGV
STPEYTSCEDVELESESVSEKGDLDYYWLDPATWHSRETSPISSHPVTWQPSKEGDRLIG
RVILNKRTTMPKESGALLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLE
WNGKPLPGATNEEVYNIILESKSEPQVEIIVSRPIGDIPRIPESSHPPLESSSSSFESQK
MERPSISVISPTSPGALKDAPQVLPGQLSVKLWYDKVGHQLIVNVLQATDLPPRVDGRPR
NPYVKMYFLPDRSDKSKRRTKTVKKVLEPKWNQTFVYSHVHRRDFRERMLEITVWDQPRV
QEEESEFLGEILIELETALLDDEPHWYKLQTHDESSLPLPQPSPFLPRRHIHGETASKKL
QRSQRISDSDISDYEADDGIGVVPPVGYRSSARESKPATLTVPEQQRATHHRSRSVSPHR
GDDQGRPRSRLPNVPLQRSLDEIHPTRRSRSPTRHHDASRSPVDHRARDADSQYLSEQDS
ELLMLPRAKRGRSAECLHTTSDLQPSLDRARSASTNCLRPDTSLHSPERERGRWSPSLDR
RRPRSPRIQIQHASPENDRHSRKSERSSIQKQTRKGTASDAERVLPPCLSRRGYAAPRAT
DQPVLRGRHPARSRSSEHPSVRTLCSTYHLAPGGSAPPSPLLTRMHRQGSPAQSPPADTA
FSSRRGRQLPQVPVRSGSIEQEQEKYNSSTKASLVVEERTRQMKMKVHRFKQTTGSGSSQ
ELDRDQYSKYNIHKDQYRSCDNVSAKSSDSDVSDVSAVSRTSSASRLSSTSFMSEQSERP
RGRISSFTPKMQGRRMGTSGRAITKSTSVSGEMYTLEHNDGSQSDTAVGTVGAGGKKRRS
SLSAKVVAIVSRRSRSTSQLSQTESGHKKLKSTIQRSTETGMAAEMRKMVRQPSRESTDG
SINSYSSEGNLIFPGVRLAADSQFSDFLDGLGPAQLVGRQTLATPAMGDIQIGMEDKKGQ
LEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDE
SPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPPSSLVDPTLTPL
TRRASQSSLESSTGPPCIRS
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtgtgtggtcagggacatggtgaagcctgctgcctgcaaaaccccaagaaat
gctgaacaccagccccatcaacctccaccgagactgcatcaacaatttgaaagctacaag
gagcaagtgaggaaaattggggaagaggcgaggcgttaccagggcgagcacaaagacgat
gctccgacgtgcggaatctgtcacaagaccaagtttgcggacgggtgtgggcacctgtgc
tcctactgccgcaccaagttctgcgcgcgctgcgggggccgcgtgtcgctgcgctccaac
aacgaggacaaagtggttatgtgggtatgcaatttgtgtcgaaagcaacaagaaatctta
accaaatctggggcgtggttctttggaagtggccctcagcagccgagtcaggatggaacc
ctcagcgatacagccacgggtcctggttcagaggtacccagagaaaagagagcccggctg
caggagcgatcgcggtctcagacccccctgagcacagctgccaccccctcccaggagccg
gctgcccccagtgcacagccagacaggagcaaaggggctgagccctcccagccagtcgtg
gggccggaacagaagcaggcgtcttccaggtctagaagtgagcctcccagagagaggaag
aagacgccggggctttcggagccgaatggcaaaggggccccaaagagcgagcggaaacgt
gcgcccaagccctcggcgcagccaggggagggggccgcggaagagcgggagcggaaagaa
aggcgggaaagccgaaggctcgagaaaggccggtcccaggactaccccgacgtgtcggag
aagcgagaggccggcccggcggcggaagacgagaagcaaaggaaggaggaggagtaccag
acccggtaccgcagcgacccgaacctggcgcggtacccggtgaagccgccgccgagagag
atgcagctgcgcatgcacgcgcgggtgtcccgggcgcggagagcggggaaagagacgggg
accnnggctgaggggggaggggaagagggaaggcaggggtggcgccaagcaggccggggc
acgccgccgggctcgccgccggtcgccgcgggctactcggaagaggggaccggggagggc
ggggacccggcgccaggccgctcgcccaacacggccgcggcgcccgggcccggggccccc
gccgacgccgcggagcccagggccccggagccgctccggaagcagagccgcctggacccc
ggcgcggccgtcctggtgcgcaaggccaagcgcgagaaggtggagaccctgctgcggaac
gactcgctgagctccgaccagtccgagtccgtgcggccgtcgccgcccaagccgcaccgc
gcaaagaggggcggcaagaagcgccagatgtcggtgagcagctcagaggaggagggtgtg
tccacgccggagtacacgagctgcgaggacgtggagctggagagcgagagcgtcagcgag
aaaggtgatttggattattactggttggatcctgccacgtggcatagccgggaaacatca
cctattagttcgcatcctgtaacctggcagccatctaaagagggcgaccgtttaattgga
cgtgttattcttaacaagagaacgaccatgcccaaggaatcaggtgcattgctaggtctg
aaagtggttggagggaagatgactgacttaggacgccttggtgccttcatcaccaaagta
aagaagggtagccttgcagacgtagttggacacctcagagcaggggatgaagttctagaa
tggaatggtaaacccctgccgggagctacaaatgaagaagtttacaacattattttagaa
tcaaaatcagaacctcaagttgaaattattgtttcaaggcctattggtgacattccacgg
atccctgagagctcccatcccccactggagtccagttcaagttcctttgaatctcagaag
atggaaagaccttccatttctgttatttctccaacaagccctggagctctgaaagatgcc
ccgcaagtcttaccaggacaactttctgtgaaactgtggtatgataaagtgggccaccag
ctaattgtgaacgtgctgcaggcaacagatctaccgccgcgggtagatgggcgtcccagg
aatccctatgtaaaaatgtattttcttccagatagaagcgataaaagtaaaaggagaacc
aaaacagtcaagaaagtactagaacccaaatggaatcaaacttttgtctattcacatgtg
catcgtagagattttagagaacgaatgttagaaataactgtgtgggatcaaccaagagtg
caagaagaagagagtgaatttcttggcgagatcctcatagaactggagacagcgctttta
gacgatgaaccacactggtacaagcttcagacacacgatgagtcctcactacctcttcct
cagccatcacctttcctgccgaggagacacattcatggggaaaccgccagcaaaaaacta
caaaggtctcagcgaatcagtgacagtgacatctcagattatgaggctgatgatggcatt
ggagtggtccctccagtaggttataggtctagtgctagagaaagtaaacctgcaacgtta
actgtgccagagcagcagagagccacccatcaccgctcccgttccgtgtctcctcatcgc
ggcgacgatcagggaaggccgcgttcacgtttaccaaatgtgccattacagaggagttta
gatgaaattcatcccacgagaaggtcacgttctccaaccagacaccacgatgcctcccgc
agcccggtggatcacagagcccgagatgcggatagtcagtatttgtcagaacaagacagt
gagcttctcatgcttcccagagcaaaacgaggacggagtgcagaatgcctacacaccacc
agtgacctgcaaccctcccttgacagggctaggagtgctagcaccaactgcttgagacca
gacactagtttgcattcaccagaacgagaaaggggtagatggtccccctccctagatagg
agacggcctcgtagccccaggattcaaatccagcatgcctctccggagaatgacaggcac
tccagaaagtctgaaagatctagcatccaaaaacagactaggaaaggcactgcctctgat
gcagaaagggttctcccaccatgtctttctagaaggggatacgcagccccaagagcgact
gatcagccagtccttaggggaaggcatcccgctcgctccaggtcgagtgagcaccctagt
gtcagaacactgtgttctacctaccaccttgcccccggagggtcggcgccaccttctccg
cttctgacaagaatgcaccgtcaaggaagcccagcccagtctccgcccgcagacacagcc
ttcagcagtcgcaggggaaggcagctcccacaagtgcccgtgagaagtggcagtatagaa
caagaacaagaaaaatataactcatccacaaaagcaagcttagtagtggaggaacgaaca
agacagatgaaaatgaaagtgcatcgatttaagcagacaacagggtctggttctagtcaa
gaacttgatcgcgatcaatattccaagtataacattcataaagatcagtacagaagctgt
gataacgtctctgccaagtcatcagatagtgatgtcagcgatgtgtccgccgtttcccga
accagcagtgcctcccgcctcagcagtacaagcttcatgtctgagcagtctgagcgcccc
cggggtaggatcagttcatttacccctaaaatgcaaggcagacggatggggacttcagga
agagccatcacgaagagcacgagtgtgagcggagagatgtatacactagagcataatgac
ggcagccagtcggacacggctgtggggacagtcggagcaggtggaaagaagagaaggtcc
agcctgagtgccaaggtggtcgccatagtgtctcgaaggagcagaagcacatcccaactg
agccaaacagagtcaggccacaagaagttaaaaagtaccatccagagaagtacagagaca
ggcatggcagcggagatgaggaagatggtgcggcagcccagtcgggagtccactgacggc
agcatcaacagctacagctccgagggaaacttgatattccctggagtacggctagcagcg
gatagtcaattcagcgactttcttgatggactgggaccagcccagcttgttggccgccaa
accctcgccacccctgcgatgggtgatatacagatcggaatggaagataaaaagggccaa
ttagaagttgaagttattagagcacggagcctcacacaaaaacctggttccaaatctaca
cctgctccatatgtcaaagtataccttttggaaaatggggcgtgcatagccaagaagaag
acaagaattgcaagaaaaacccttgatcctttgtatcaacagtccctggtttttgacgaa
agtccccagggtaaagtccttcaggtgattgtctggggagactatggcagaatggaccat
aaatgctttatgggtgtggctcagatcttgttggaagagctcgatctgtccagtatggtc
atcggctggtacaaattgtttccaccgtcatcactagtcgaccccaccctcactcccctg
acccgccgggcttcccaatcatctctggaaagttcaactgggcctccctgcatccgatcc
tag
DBGET
integrated database retrieval system