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Carassius gibelio (silver crucian carp): 127992578
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Entry
127992578 CDS
T08819
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127992578
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127992578
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127992578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup214_FG
ANAPC4_WD40
WD40
NUP214
Motif
Other DBs
NCBI-GeneID:
127992578
NCBI-ProteinID:
XP_052447626
LinkDB
All DBs
Position
A5:9870340..9934195
Genome browser
AA seq
2010 aa
AA seq
DB search
MGDDPDSTQEREMKDFKFRQMKKIRVFESSVDLPKERSSLLTISNKYGLTFAGRGGMLKV
FWTRDVTAAGRLEGNPNDTVECSCAVTVTVGLAMHQMALSSDELTLSVCGTGDAAELTLH
FYDVRSFLNKDRQEKRPFTSFRPMAAADTLVQDLKWSPVDASRLAVCLSDGSMMVLDVQD
SVSVVAQLPASVGITCVCWSPKGKQVSAGKEDATVVQFTPTLQAKKVIPCPSFYSQDHPV
KVLDVLWLSTFNFAVVYAAADGSLETPPELVVISLPKKDEKRDECFLNFNDLVYGSCTER
QHHYFLCHIEDWDLVLAASAAATEVSVIAKQEDKVNWELWVLEYASRAELPVSENSEDTL
PVGMAIDYTSQEDIHLSDEKRLPPAPTLMLLSTDGVLCPFSLLNLNPGVRQLTVSAVPLP
EDGERAPAAKSSSFSSAPDSSASSIFPSVPASFGTALPPATLSFTAPPPAAAAATSSALP
TSVSSSNFSFSLPAPNSNGPSGFSLGSTTSGFSFNAPKPSSNAPALSFTSSFAPKEVSSA
PTAIPAKRPPAMSPVISDPKAPVEPATPATPAVRMNLTDSRFLEVDSRASVTSTAQPFSL
TSTPKPAAAEVSGLTTAVLKPAAPAVLSRAAQISAPPAAPLKPAAVAPPASNAPSAQAVS
VKAMEKHLQQKKDSDPVMTGILEEIGHFEKELDDLKTRCRNADFRVGSNDDMRDLRKDSE
NVHAFTLEIRDTTESLHGDISMLKTSLLEGFAGAEEARAQSELNRDKDYLQLLYKKPLDP
RREEQLKEIHHLYQYVKFAMEDVNAVLDMEWEKHLKKKQRHMIAPEREALFATLANNLDI
INQQKQRLDRLESDLHKLRLYRGTSVWSFTSQTPSTPSGQSLDSELESLKDSLLKASLET
APKVPAKSPPKMTPGKQSQLRNFLSKRQTPPVHSTAPANLSQSAFLSPRFYEDLDEVSSI
SSLSQPLEPEDLLAVAEEEDEPAPIPLRTPTVPRHPAVFRTPSIQPGFSMQPSPFSRVHT
SPGPVLVPIISPAPKINMDSADSTALATKTVKHGAPPTEKSMPTTIPAHQAAARAALSRH
MTNQKPGASLTESTLKMVPQVVNVQELKDKGPPIPVSTIISASVPAPAAQMVQQVLATVE
ANKNSFQGVLKVPAPLAGPAQTTSASLVFGGAPKPDAGASSSISEKNSKSFSFTAPSSGF
SFTSQSQDTNNTQAKSSSLPGKFSFASSMGTKMAFGPVGSEVPFPKLASPAHSVSSSTPP
PEPSKLSQAPKAQGNAGETLGSFSGLRVGHNEELTEAPKTTLSFSFGPPGNSSTGFEFGS
AQIKAAETGSLSESTDAAADAPKMTIAQGFATSPFTFKPQEGTAPSVKPTFTIPSTSSFS
TAATSFGSLLQAPLSETLNLPMKSLQPETTTSTEPAPSTDTELKEPPAEPSPKPPTLIAP
SAIPVTEASAPTSSEPTKAPSNKPPSPPTLGVSPTPPLSLTPPSEILVPVSESPAAEPVS
DPPPKTTSTSTAPPLPQEIPATTSSSIPASDKPGSIFAPPSSGTGNLTVGAISLTNVVAT
VASSIPSAAITTSTAPTPGPVFEQPSSVTQTTAFGTTNFGTNSTTSGFGKPAFGQSASAG
FGQPAASGTASSFSFAQPAFSANPGFGQPAIASTTSATSSGGGGGLFGSSSANSASSFSF
VASSTSSIPSTGTGLFGQSSAPVFGQSSSGFGQGSTFGSNTTTASSSGFGFGQQSMFGSS
TSTSSVFGQKATGSGIFGQTQSSGSLFGSNTGNPSSGSGFFSGLGGKPSEDAANKNPFGS
PATGGFGQPINTAPPNLFGSSGAKGFSFGSSPFGEQKPSGSFSSSTGSVAAQGFGSFSTP
TKPAGFGGGPVFSSPPTFGGTPAFGGSAGFGSTPSFSSPLGSSSGKVFGEGTTAANVGGF
GFGSPQNDAPSFGSLAGSSTAPSFGSLAGSSTAPASSFGSLAQQTQPPSGFGTQSGAFSG
FGSSGGFGGFGSTNTNTNQAPSQTFSSWRS
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgatccggactctactcaagaaagagagatgaaggacttcaagttccgtcag
atgaagaagatccgtgtgttcgagtcatctgtggatcttcctaaggagcgctccagtctc
ctcaccatctccaacaaatatggcctgacgttcgctggcagaggcgggatgctgaaagtg
ttctggacgagagacgtgaccgcagccggccgtctggagggaaaccccaatgacaccgtg
gagtgctcctgcgcggtcacagtgactgtcgggctggcgatgcatcaaatggctctgagc
agcgacgagctgacgctgtctgtgtgcgggacgggggacgcagcagagctcacgctccac
ttctacgacgtccgctccttcctcaacaaggacagacaggagaagcgtcccttcacctct
ttcagacccatggccgctgcagacacactggtccaggatctgaagtggagtccggtggac
gcgtcccgtctggccgtgtgtctgtctgacggcagtatgatggtgctggacgttcaggac
tccgtcagtgtggtcgctcagcttcctgcctctgtgggaatcacatgcgtttgctggagt
cccaaagggaagcaggtgtctgctgggaaagaggatgccacagtggttcagttcactcct
accttacaggccaagaaggtgattccttgtcccagcttctacagtcaggatcaccccgtc
aaagtgctggacgtgttgtggttgagcacgtttaactttgcggtggtgtacgcagcggct
gatgggtctctggagacgccgccggagctggtggtcatatcgctgcctaaaaaggatgag
aagagagacgagtgctttctgaacttcaatgaccttgtgtacggctcctgcactgagagg
cagcatcactacttcctgtgccatatcgaggactgggacctggttttggctgcatcagcc
gctgctactgaagtcagcgttatcgctaaacaggaggacaaggtgaactgggagctgtgg
gtgctggaatatgccagtcgagcagagcttcctgtctcagagaacagtgaggacacactt
cctgtgggcatggccatcgattacaccagccaggaggacatacacctctctgatgaaaag
aggttgcctccggcgccgacgctgatgctgctgtctacagatggagttctgtgtcccttc
tctttactgaacctcaacccaggggtcagacagctgaccgtatctgccgtcccgctgcct
gaggatggcgagagagcgcctgctgctaagtcatcttcgttctcttctgctcccgactct
tcagcgtcctccatcttcccatctgtcccagcatcttttggcacagccctgcccccagcc
accttatccttcacagccccgcccccagcagccgctgctgccacctcctcggccctgcct
acctccgtgtcctcctcaaatttctccttctctcttcctgctccaaactctaacggtccc
tctggcttctcgctgggctccaccacatctggtttctcctttaatgctcccaaaccctcc
tccaatgctcctgccttgtccttcacttcctccttcgcgccaaaggaggtcagcagtgct
ccaacggccattcctgctaagcgtccgcctgccatgtctcccgtcatcagcgatcccaaa
gcacctgtggagcctgcgacacctgcgacacctgctgtcaggatgaacctcactgacagc
aggtttctggaggtggactctcgggcatcagtcacatctactgcccagccgttttctttg
acctccacgcccaaacccgcagcagcggaggtcagtggcctaacgacagcagtgctcaaa
ccagccgcccctgcagtgttgtctcgggccgctcaaatcagcgctcctccagccgctccg
ctaaaaccagccgcagtcgctcctcctgcgtccaacgctccgtctgcacaggccgtgtct
gtgaaagcaatggagaaacacctgcagcagaagaaagactcggaccccgtcatgactgga
atactggaggagatcggacactttgagaaggagctggacgatctgaagactcgctgcaga
aatgctgatttcagggtgggcagcaacgacgacatgagagacctgaggaaagactcggag
aacgtacacgccttcacgctggagatcagagacaccactgagtctcttcatggggacatc
agtatgctgaagaccagcctgctggagggtttcgctggagcagaggaggcgcgagctcag
agtgaactaaaccgagacaaagactacctccagctgctctacaagaaaccactagaccct
cggcgagaggagcagctcaaggaaattcaccacttgtaccagtatgtgaagttcgccatg
gaggacgtcaatgccgttttggacatggagtgggagaaacacttgaagaagaaacagagg
cacatgattgccccagaaagagaggctctgtttgcaacactggccaataacctggacatc
atcaaccagcagaagcagcgcctggaccgtctggagagtgacctgcacaagctgaggctc
tacagagggacgtcagtgtggagcttcaccagccagacgccctccaccccctcaggacag
agtctggacagtgaactggagagtttgaaggattctcttctgaaggccagtctggaaaca
gcacctaaagttcctgccaaatcaccacctaaaatgaccccaggcaaacagtctcagctg
aggaacttcctgtcaaagcggcagactccaccggtgcactccacagctccagccaacctg
tcgcagtcagccttcctgtctcctcggttctatgaagatctggatgaggtgagctccatt
tcgtctctgtctcagcctctggagcctgaggacctgctggccgtggccgaggaagaggat
gagcctgcgcctatcccattgcggacacccactgtcccgcgacaccccgcggtgttccgg
acaccctccatacagccgggcttcagtatgcagcctagtccattcagcagagttcatacc
agccccggccctgtcctcgtccccatcatcagcccggctccgaagataaacatggacagt
gccgatagcacagcattagccacaaaaacagtcaagcatggagctccgcccacagagaag
agcatgcctaccacaatccccgcccatcaggctgcagcaagagctgccctcagcagacat
atgaccaaccagaaaccaggagcatctctaacagagtctacactcaagatggttcctcag
gtggtaaacgtacaggaactgaaggataaaggtccgccaatacctgtgtccaccatcatc
agcgcatctgttccagcacctgcggctcagatggttcagcaagttctggcaacggtggaa
gccaataaaaattcatttcaaggtgtgttaaaggtcccagcaccgctggcaggtccagcc
cagactacatcagctagtcttgtgtttggtggagctcctaaacctgatgcaggagcttct
tcatccatcagtgagaagaactcgaagagcttttcatttactgctccgtcatcagggttc
agtttcacctctcaatcacaggacaccaacaacactcaagcaaagagttctagcctaccg
ggcaagttctcttttgcaagcagcatgggaacaaagatggcgtttggtcctgtggggtct
gaggtgccttttccaaaattggcatctcctgcacacagcgtgagctcctctacaccacct
cctgagccatctaaactctctcaagctcccaaagcccagggcaatgctggagaaactctc
ggctccttttctggcttaagagtgggccacaatgaagaactaactgaagctcccaagacc
accttgagtttctcttttggaccacctggcaattcatctacaggatttgaatttggttct
gcacaaatcaaggctgcagaaactggaagtttatcagaatcaacagatgctgcagcagat
gctccaaagatgactatagcacaaggatttgccacatctccattcacctttaaaccacag
gagggaactgctccttcagtaaagccaactttcaccattccctcaacatcttccttttct
acagctgccacttctttcggtagtcttctgcaagcacctttgtcagaaacgctaaatctt
ccaatgaagtccctacagccagagacgacgacttcaactgagccagctccctccactgat
actgaacttaaggaacctccagcagaacccagtcctaaaccaccaaccttaattgctcca
tcagccataccagtcactgaagcctctgctcccaccagttctgagcctactaaagctcct
tccaacaagcccccatctcctccaacccttggggtgtcgcccactcctcctctctcactt
accccaccatctgagatcctggtgcctgtttctgagtctcctgcagcagagccagtgtct
gatcctccccccaagaccaccagcacttccacagcccctcctttaccccaagagatacca
gcaaccacctcatcttcaattccagcgtccgacaaaccaggctcaatctttgccccacct
tcaagtggcacaggcaatctgactgtaggagccatcagtcttaccaatgttgtcgctaca
gtggcctcctccatcccatctgctgccatcaccaccagcacagctccaacaccaggccca
gtcttcgaacaaccctcttcagtcactcagaccacagctttcggaactaccaactttggc
accaattctaccacctctggctttggcaaacctgcctttggacagagtgcaagtgcaggt
tttggccagcctgccgcctctggaactgctagcagcttctcttttgctcagccggcattt
agcgcaaatcctgggtttgggcagccagctatagcctccaccacatcagccaccagcagt
ggaggaggaggaggactgtttggatcctctagcgccaacagtgccagttccttctcattt
gtagccagcagcaccagctccatacccagcactggaactgggctctttggccagagcagc
gctcctgtctttggtcagtccagctcaggctttggccagggatccacatttgggagcaac
accaccacagcatcctcctctggattcggctttggacaacaatcaatgtttggcagcagc
acctccacctcatcagtgtttggacagaaggccaccggatccggcatctttggacagact
cagtcaagcggaagtctgtttgggtcaaacactggaaacccttcatcaggatcaggattt
ttcagtggtcttggaggaaaacccagtgaagatgctgccaacaaaaacccgtttggatcg
ccagccactggtggattcggtcaacccattaatacagctccacctaacctgtttgggagc
agtggagcaaagggctttagtttcggcagcagtccgtttggcgaacagaaacccagcggt
tcattcagctccagcacggggtctgtggccgcacagggtttcgggtcattctctacaccc
accaaaccagctggtttcggaggcgggccggtcttcagcagtcctcctactttcggtgga
actccagcgttcggtgggtctgcgggttttggctccaccccttccttcagcagtccgctg
ggctcctcctctgggaaggtgttcggtgagggaaccacggccgccaacgttgggggattt
gggttcgggtctcctcagaacgatgcgccgtccttcggctctctagcgggttcgagcacg
gcgccgtcgttcgggagtctggcgggttcgagcacagcaccggcgtcgtccttcgggagt
ctggcgcagcagacacagcccccgtcaggattcggcactcagagcggtgctttctccggc
ttcggctcgtctggaggttttggaggttttgggagcaccaacactaacaccaaccaagcc
ccgtctcagacgttcagcagctggaggagttga
DBGET
integrated database retrieval system