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Cavia porcellus (domestic guinea pig): 100714438
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Entry
100714438 CDS
T07777
Symbol
Scn9a
Name
(RefSeq) sodium channel protein type 9 subunit alpha
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
cpoc
Cavia porcellus (domestic guinea pig)
Pathway
cpoc04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
cpoc00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100714438 (Scn9a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpoc04040
]
100714438 (Scn9a)
Ion channels [BR:
cpoc04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100714438 (Scn9a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
Lustrin_cystein
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
100714438
NCBI-ProteinID:
XP_012997887
Ensembl:
ENSCPOG00000013017
LinkDB
All DBs
Position
Unknown
AA seq
1986 aa
AA seq
DB search
MATLPPPGSQSFVRFTKQSLAHIEQRIAERKAQEPKEEKKDDDEEGPKPSRDLEAGKQLP
FIYGDIPPGLVSEALEDLDPYYADKKTFIVLNKGKAIFRFNATPALYILSPFSPLRRISI
KILVHSLFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFCVGE
FTFLRDPWNWLDFVVIVFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGILKQKCLQDEIAKNETAISMLDKFKNEELKK
YVYYLEGSKDALLCGNSTDSGQCPEGYTCVKLGRNPDYDYTSFDTFSWAFLALFRLMTQD
YWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKEL
EFQQMLDQLKKEQEEAEAIAAAAVEYTSIRRSQIMGLSESSSETSKLSSKSAKERRNRRK
KKNQKKLSSGEEKGDDEKMSKSESEESIRRKSFFLGVEGHRQAREKRLSTPNQSPLSIRG
SLFSARRSSRTSLFSFKGRGKDIGSETEFADDEHSIFGDNESRRGSLFLPPRFRERRSSN
ISQASRSPPMLPVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTT
IHIRKKRCSSSYFLSEDMLNDPHVRQRAMSRASILTNTVEELEESRQKCPSWWFRFARTF
LIWNCSPYWIKFKKIIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLTVGNL
VFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINE
DCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDPDANNLQIAVTRIKKGIDYVKQTTHEFILKAFSIKPKVS
QEIRRAEDLNSKKENCISNRTLAEMSKDRIFHKENDKGSGFGSSMDRNLTEESDYQSFIH
NPSLTVTVPIAPGESDLENMNTEELSSDSDSDYSKERLNRSSSSECSTVDNPVPGEEEAE
AEPTNSDEPEACFTDGCVRRFPCCQVNTESGKGKIWWNIRKTCYRIVEHSWFESFIVLMI
LLSSGALAFEDIYIEKKRTIKVILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWLD
FLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGLRFLETRVQNRSECFALMNGTTDVRW
KNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVDQQPKYEYNLYMYIYFVIFII
FGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGN
KFQGCIFDLVTNQAFDITIMVLICSNMVTMMVEKEGQSAEITNVLYWVNVVFIILFTGEC
VLKLISLRHYYFTVGWNIFDFVVVILSIVGMFLADMIEKYFVSPTLFRVIRLARIGRILR
LIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFE
TFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPHKVHPGSLTEGDCGNPSVGIFYFVS
YIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSKL
SDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDSLRSQ
MEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRHYRLRKNVKNLSSIYIKDGDR
DGDLPDKKEIAFENVNGNCSPEKTDATPSTISPPSYDSVTKPDQEKYETDETEKEDKGKD
GKESKK
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgttgcctcccccaggatctcagagctttgtccgcttcacaaaacagtctctt
gcccacattgagcagcgcattgctgagagaaaagcacaggaacccaaagaagaaaagaaa
gatgatgatgaagaaggcccaaagcccagcagggacttggaggctggcaaacagttgccc
ttcatctacggagacatccctccaggcttggtgtcagaggcgctggaggacctggacccc
tactacgcagacaaaaaaacttttatagtattgaacaaagggaaagcaatcttccgtttc
aatgccacacctgctttgtacatactatctcccttcagtcctctcagaagaatatctatt
aaaattttagtccactccttattcagcatgcttatcatgtgcactattctgacaaactgc
atatttatgaccatgagtaaccctccagattggaccaaaaatgtagagtacacttttact
ggaatatacacttttgagtcacttataaaaatccttgcaagaggtttttgtgttggagaa
ttcacttttcttcgggatccatggaactggctggattttgtcgtgattgtttttgcatat
gtgacagagtttgtggacctgggcaatgtctcagcgttgagaacattcagagttctccga
gcactgaaaactatttcagtcattccaggcctgaagaccatcgtgggggcgctgatccag
tcggtgaagaagctgtcagatgtcatgatcctgactgtgttctgtctgagcgtgtttgcg
ctaataggactgcagctcttcatgggaatcctgaagcaaaaatgtttgcaggatgaaatt
gcaaagaatgaaacagctatcagcatgctggataaatttaagaatgaagaactgaaaaaa
tatgtttattatttggagggatccaaagacgctctcctctgtggtaacagcacagattca
gggcagtgtccagaagggtacacctgtgtgaagttgggcagaaacccagattatgactat
acaagctttgataccttcagctgggctttcttagccttgtttaggctaatgacacaggat
tactgggaaaacctttaccagcaaacactgcgtgctgctggcaaaacctacatgatcttc
tttgtagtagtgattttcctgggttccttttatctaataaacctgattctggctgtggtt
gctatggcctatgaagaacagaaccaggcaaacatcgaagaagctaaacagaaagagtta
gaatttcaacagatgttagatcaactcaaaaaagagcaggaagaagccgaggcaattgca
gcagcagcagttgaatacacaagtattagacgaagccaaatcatgggcctctcagagagt
tcttcagaaacatccaaactgagttccaaaagtgctaaggaaagaagaaacagaagaaag
aaaaagaatcaaaagaagctttccagtggggaggaaaagggagatgatgagaagatgtcc
aagtcagaatcggaggaaagtattcgaaggaaaagcttcttcctcggtgttgaggggcac
aggcaagctcgtgagaagagactctccacccctaatcagtcaccactcagcattcgtggc
tccctgttttctgcaaggcgcagcagcaggacaagtcttttcagtttcaagggtcgtgga
aaagacataggatctgagactgagtttgctgatgatgagcacagcatttttggagacaat
gagagcagacggggctcactcttcctgcccccgagattccgggagcggcgcagcagtaac
atcagccaagccagtaggtcccccccaatgctgccagtgaacgggaagatgcacagtgcc
gtggactgcaatggtgtggtttccctggttgatggaccctcagccctcatgcttcccaat
ggacagcttctgccagaggtgataatagataaggcaacttctgatgacagcggaactacc
attcacatacgcaaaaaaagatgttccagttcttattttctttcagaagatatgctgaat
gacccccatgttcgacaaagagcaatgagtcgagcaagcatcctcacaaacactgtagaa
gaacttgaagagtctagacaaaaatgtccatcttggtggttcagatttgcacgcacattt
ttgatctggaattgctctccatattggataaaattcaaaaagattatctattttattgta
atggacccttttgtagatcttgcaattaccatttgcatagttttaaacacattatttatg
gctatggaacatcatccaatgactgatgaattcaaaaacgtactcactgtgggaaatttg
gtatttactggcatctttgcagctgaaatggttttgaaattaattgccatggatccatat
gagtatttccaagtaggctggaatatttttgacagtcttatagtgactttaagtttggta
gaactttttctatcagatgtggaaggattatcagttctgagatcatttaggctgctccga
gtcttcaagttggcaaaatcctggcccacgctgaacatgctgataaagatcatcggcaat
tccgtgggggccctgggtaacctcaccttggtgttggccatcatcgtcttcatcttcgcc
gtggtcggcatgcagctctttgggaagagctacaaagaatgcgtctgcaagatcaatgag
gactgcacgctcccacgctggcacatgaatgacttcttccactccttcctgatcgtgttc
cgcgtgctgtgcggagagtggatcgagaccatgtgggactgcatggaggtcgccggccaa
actatgtgccttattgtctacatgatggtcatggtcattggaaacctagtggtcctcaac
ctgtttcttgctttattattgagttcatttagttctgataatctaacagcaattgaagaa
gaccccgatgcaaacaacctccagattgcagtgaccagaattaaaaagggcatagattac
gtgaaacaaaccacgcatgagtttattctgaaagcattttcaataaaaccaaaggtttcc
caggagataagacgagcagaagatctaaacagcaaaaaggaaaactgtatctctaatcgt
acacttgccgaaatgagcaaagatcgtattttccataaggaaaatgacaaaggcagtggc
tttggaagcagtatggacagaaacctcacggaagaaagtgattaccaatcatttattcat
aatcccagcctcacagtaacagtgccaattgcacctggggaatctgatttggaaaatatg
aatactgaagaacttagtagtgattctgacagtgactatagcaaagagagactgaaccga
tcaagttcctctgagtgcagcacagttgataaccctgtgcccggagaagaagaagcagag
gctgaacctacaaattccgatgagccggaagcctgctttacggatggttgcgttcggaga
ttcccgtgctgccaggttaacacagagtcaggaaaaggaaaaatctggtggaacatcaga
aaaacctgctacaggatagttgaacacagctggtttgaaagtttcattgttctcatgatc
ctgcttagcagtggagctctggcttttgaagatatatatattgaaaaaaaaaggaccata
aaggttatcctggagtatgctgacaagatattcacctacatcttcattctggaaatgctt
ttaaaatgggtggcatatgggtataaaacatatttcaccaatgcatggtgttggctagat
ttcttaattgttgatgtctctttggttactttagttgctaacactcttggctactcagac
cttgggccaattaaatctcttcgaacacttagagctttacgacctctaagagccttatct
agatttgaaggaatgagggtggttgtgaatgcactaatcggtgcaattccttccatcatg
aacgtgctcctcgtatgtctcatattctggctaatatttagcatcatgggagtgaatttg
tttgctggcaagttctatgagtgtgttaacaccacagatgggttacggtttctggaaact
agagttcaaaaccgttctgagtgttttgcccttatgaatggtaccactgacgtgcgatgg
aaaaacctgaaagtgaactttgataatgttggactgggttacctgtctttgcttcaagtt
gcaacatttaagggatggatggatattatgtatgcagcagttgattctgttaatgtagac
cagcagcccaaatatgaatacaacctctatatgtatatttattttgtcatctttatcatc
tttgggtcattcttcactcttaatttgttcattggtgtcatcatagataatttcaaccaa
caaaaaaagaagcttggaggtcaagatattttcatgacagaagaacagaagaaatattac
aatgctatgaaaaagctgggatccaagaagccacaaaagccaattccccggccagggaac
aagttccaaggatgtatatttgatctcgtaacaaatcaagcctttgacatcaccatcatg
gttcttatctgctccaatatggtaaccatgatggtggaaaaagagggacagagtgcggaa
attaccaatgttctgtactgggtaaacgtcgtgttcattatcctgttcactggagagtgt
gtgctgaaactcatctccctcagacattactacttcacagtgggatggaacatttttgat
tttgtggttgtgattctctccattgtaggtatgtttctcgcggacatgatagagaagtat
ttcgtgtcccctaccctgttccgagtgatccgtctggccaggataggcagaatccttcgc
ctgatcaaaggagccaaggggatccgcacgctgctctttgctttgatgatgtcccttcct
gccttgtttaacatcggcctcctgctcttcctggtcatgttcatctacgccatctttgga
atgtccaactttgcctatgttaagaaggaagctggaattaatgacatgttcaacttcgag
acatttggcaacagcatgatctgcctgttccaaattaccacctctgctggttgggacgga
ctgctggcacccattctcaacagcggacctccagactgtgaccctcacaaagttcatcca
ggaagtctaactgaaggagattgtgggaacccatctgttgggattttctattttgtcagt
tacatcatcatttccttcctggtggtggtgaacatgtacatcgctgtcatccttgagaac
ttcagtgttgccactgaagagagtaccgaacccctgagtgaggatgactttgagatgttc
tatgaggtctgggagaagtttgaccctgatgcaactcagtttatagaatacagcaagctc
tcggattttgcggctgccctagatccccctcttctcatagcaaaacctaacaaagtccag
ctcattgccatggacttgcccatggtcagtggagaccggatccactgcctggacatctta
tttgcttttacaaagcgggttttgggtgaaggtggggagatggactctcttcgttcacag
atggaagaaaggttcatgtctgcaaatccttctaaagtgtcctatgaacctatcacaact
acactgaaaagaaagcaagaggatgtgtctgctactgtcattcagcgtgcttacagacat
taccgcttacggaaaaatgtcaaaaatttatcaagtatctacataaaagatggagacaga
gatggtgacttgcctgataaaaaagaaatagcttttgagaatgttaatgggaactgcagc
ccagaaaaaacagatgcaactccatctaccatctcgccaccttcatatgatagtgtgaca
aagccagaccaagagaaatatgaaacagacgaaacagagaaggaagacaaagggaaagat
ggcaaggaaagcaaaaaatag
DBGET
integrated database retrieval system
