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Epinephelus fuscoguttatus (brown-marbled grouper): 125891638
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Entry
125891638 CDS
T08419
Symbol
agrn
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04512
ECM-receptor interaction
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125891638 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
125891638 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
efo00535
]
125891638 (agrn)
Proteoglycans [BR:
efo00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
125891638 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
CFAI_KAZAL
Laminin_EGF
SEA
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
125891638
NCBI-ProteinID:
XP_049436983
LinkDB
All DBs
Position
LG7:9818194..10120645
Genome browser
AA seq
2094 aa
AA seq
DB search
MGSQRTLGAGRTALLLAGLLVALWHRCAASCPERDLEEREEEANVVLTGTVDEIINVDPV
HNTYSCKVRVWRYLKGKSSVNREILLDGGNKLMIGGFGNPGICDNQVATGDTRIFFLNPA
PEAMGPEHKNELMLNSSLMRITLRNLEDVEHCVEDKPPHFTPAQPPDGCRGMLCGFGAVC
ERDQTDPAKADCVCKRVDCPSLVAPVCGSDSSTYSNECELEKAQCNTQRRIKVLRKGPCS
LKDPCTEVTCSYGSTCVQSSDGLSAKCMCPLDCEGKPVQTVCGSDGKDYRNECELHQHAC
KNQKNIRMQYQGHCDPCKDSENSLSTMCRVEALTRQPLIFGLPESCPPGNEPLCASDGQT
YASECAMTATGMQKGIKLRKIHAGRCRRLEDCQEECLFNAVCLVEQLNARCSCDPIECDG
TYKPVCGKDGRTYTNDCMRRKAECLSRTLISIKHQGPCDLSIPSPCLDKVCDHGAVCVVK
NNEPVCECPEACPQTSDPVCGSDGHSYGSPCEMRAMGCALQRNILIQHKGPCDEACANCS
FGAICDAQSGQCVCASECVESHQPVCGSDGSTYNSECELHVRACKQQMDLRVVSQGECKT
CGNTVCAWGARCVQNKCECPQCLDEPFSPVCGSDGTTYNNECELRASSCMRKRRIDVAKP
GSCDEDCGSGGSGSGVESCEQDRCRTFGGSWDEDAEDDRCVCDFTCQSVPHNPVCGSDGK
NYSNECQLKKARCEKQEHLLIQNQGPCAAISATSLPELTAPQHCSLSVYGCCHDNTTTAM
GVGLAGCPSTCQCNVYGSYKRTCDPTTGQCSCKPGVGGQKCDRCEPGFWNFRGIVTENMS
GCTPCNCDATGSVRDDCEQMSGLCSCKTGVKGMKCNVCPDGSKMGMNGCDKGPEALTSCE
DLVCSFGATCIEVNNQGHCECPSPDCDEKNKTKVCGSDGVTYADQCQLRTIACRQDKDIT
VQHFGQCTETISEPADRPTPNPPATTPSSTAAATFTTPAPSHPNMVWAMPPPRTTDTETS
EQPSASTHPPTPINNQAEPRHPIHIQPQPQSTAATITSSSNRSPAPSAAATSFDGSGSGE
PSGDDQTEEEEEQEEEAGSGVPTEASGAEEPVGPTLASTTVPTAEDRSSCDNTEFGCCPD
GKTPSSTPEGANCPSTMRFSGFLHLDQVEGQEIFYTPEMEDPKSELFGETARSIESALNE
LFRKSEVRKDFMSVRVRSLAPSNSILAFVEAHFKPDTRYTVEDIEGALLKQLKASKETSI
AVKKPEDENIRFTNYGLSSIPVFTTTTTTTASVTTAAPTTTRPPQTTPYVTRRPYNGRRT
TTTSAPVTTPPPPTTTTTRPPPTTPYVTRRPYNGRRTTTTSTTTTALPPATTIAHVRGKL
HHKAQKPCSSHPCLHGGTCEDDGNDFSCKCPAGRGGSVCEKVIRYFIPSFGGQSYLAFQT
MSAYHTVRIAMEFRASEMTGILLYNGQEGKKDFISLALVNGKVELRFNTGSGTGTVISKV
KVNQGRWHQLVVTRNRRNAMLSVDNEPHIEGESPRGTDGLNLDTHLFIGGVPEEIKLDVR
ERTEVATGLVGCIRLLDVNNRLLNLQENGGDSLYGSGVGECGNNPCQPNPCKNGAACQVK
EAEMFHCKCSKGFWGPTCADVHDPCEPNRCHPSSQCQAMPEGGYKCECPMGREGRHCEKV
AERRGAYMPLFNGDSYLELKGLHLYGHDLRQKVSVTVILMANDSNGLIFYNGQKSDGKGD
FISLSLNEGILEFRYDLGKGPATIRSKEPIQLNVWNTISLERSNRKGEIMVNKKDPVRGE
APNLHVDLNLKESLFVGGAPDYSRLARVAALTDGFKGTIQKIILMGTPILREENALRSSN
IAMFQDHPCSHEPCHNGGRCNPMLDTYECVCLSGFSGGHCQNTIYEKSAGETEAIAFDGR
TFIEYHNAVTKSEKALLVNKFELSIRTEATQGLVLWSGKGVERSDYIALAIVDGHVQMTY
DLGSKPVVLRSSVRVDTNRWIRIKASRALRDGSLQVGNEAAVTGSSPLAATQLDTDGALW
LGGLEELAVARRLPKAYSTGFVGCIKDVVVDGVELHLVEDALNSPKILHCPAAK
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgggttcccagcggacactcggggccggccggacagcgctgcttctggcggggctgctc
gtggctctgtggcaccgctgcgccgcaagttgcccggagagagacttggaggagagggaa
gaagaggccaatgtagttttgaccggcacggtggacgaaataattaacgtggacccggtg
cataatacctattcttgcaaggtcagggtgtggcgctacttgaaagggaagtccagtgtc
aaccgcgaaattctcttggatggcggcaacaagttgatgatcgggggctttggcaatccc
gggatctgtgacaaccaggtagccacaggcgacacacgaatattctttctcaaccctgct
ccagaggccatggggccagaacacaagaacgaacttatgctcaactcaagtctgatgagg
attactctgcgcaacctggaggacgtggaacactgtgtggaagacaaacctcctcacttc
acaccggcccagcctcctgatggctgcagagggatgttgtgtggcttcggcgctgtatgc
gagcgtgaccagactgacccggccaaggctgactgtgtttgcaagagagtggactgtccg
tccttggtggcgcctgtgtgcggctcagattcgtccacctactccaacgagtgcgagctg
gagaaagctcagtgcaatacacagagacgcatcaaggttctacgcaaggggccctgctct
ttgaaggacccttgcactgaggtgacctgcagctacgggagcacctgcgtacagtcctca
gatggcttgtcagctaaatgcatgtgccccctcgactgcgagggcaagcccgtgcagaca
gtctgtggcagtgacggaaaggactaccgcaatgagtgtgagctccatcagcacgcctgc
aagaaccagaagaacatacgaatgcaataccaggggcactgcgacccatgtaaagacagt
gagaacagtctgagcaccatgtgccgggtggaggctctcacccgccagcccctcatcttt
ggcctgccagagtcgtgccccccaggtaatgagcctctgtgtgccagcgacggccagacc
tacgccagcgagtgcgccatgacagcaactggcatgcagaaaggcatcaagctcaggaag
atccacgcgggacgatgcagaaggctagaggactgtcaggaggaatgtctcttcaacgct
gtgtgtctggtggaacagctgaatgcccgctgctcctgcgatcccatcgagtgcgacggc
acttacaagcccgtgtgcggcaaggacggccgcacctacaccaatgactgcatgagacgc
aaggcggagtgtctgagcaggaccctcatctccatcaagcaccaagggccctgtgatctc
agcataccgagcccctgcctggataaggtgtgcgatcatggggcggtgtgcgtggtcaag
aacaacgagccggtgtgcgagtgccccgaggcctgcccgcaaacatccgacccggtgtgc
ggatccgacggccacagctacggcagcccctgcgagatgcgagcgatgggttgtgccctg
cagaggaatattctcatccaacacaaaggaccctgtgatgaggcttgtgccaactgctct
ttcggggcaatctgcgatgcccagagcgggcagtgtgtgtgtgcatcggagtgtgtggag
tcccaccagcctgtgtgcggcagcgatggcagcacctacaacagcgagtgtgagctgcac
gtgcgtgcctgcaaacaacagatggacctccgagtggtcagccagggagagtgcaaaaca
tgcggcaacactgtttgtgcctggggtgcccggtgtgtccagaacaagtgtgagtgccca
cagtgcttagacgagcccttctctccggtgtgtggaagtgatggcaccacctacaacaac
gagtgtgaactccgtgcgtcctcctgcatgcggaagaggagaattgatgtggcgaagccc
ggcagctgtgatgaagactgcggctcaggagggtcaggctcaggcgttgagagctgcgaa
caggaccgctgtcgcacgtttggaggctcatgggacgaagatgctgaggacgaccgctgt
gtctgtgacttcacctgccaaagtgttccccacaacccggtttgtggctcagatggaaaa
aactacagcaatgagtgccagctgaagaaggccagatgtgagaaacaagagcacttgttg
attcaaaatcagggaccctgtgcagcgatttcagccacatctctgcctgagctgacagca
ccccagcactgcagtctgtctgtgtacggctgctgccacgacaacacaacgactgccatg
ggagtcggactggctggatgtcccagtacctgtcagtgtaatgtctacggctcctacaag
cgaacgtgtgatccaaccaccggccagtgctcctgtaagccaggcgtggggggacagaag
tgtgaccgctgtgagccaggcttctggaacttccgtggcatcgtgacagagaacatgagc
ggctgcacaccgtgtaactgcgatgccacaggctccgtccgggacgactgcgagcagatg
tcgggtctgtgttcctgcaagacaggagtgaagggcatgaagtgcaacgtgtgtccagat
ggaagcaagatgggcatgaatggctgcgacaaaggtcctgaggctctgacttcatgtgaa
gatttagtgtgcagttttggagctacttgcattgaggtgaacaaccaaggccactgcgag
tgcccttcacctgactgtgatgagaaaaacaaaaccaaggtgtgtggctcagacggggtg
acctatgccgaccagtgccagctgaggaccatagcctgtagacaggacaaggacatcaca
gtgcaacactttggacagtgcacagaaaccatctctgagccggcagaccgacccaccccc
aacccccctgccactacccccagctcaaccgccgccgccaccttcaccacccctgccccc
tcccaccctaacatggtgtgggccatgccgcctccaaggacaaccgacacagagacctct
gagcagccctcggcctccacccaccctcccacccccatcaacaaccaagcagaaccccgc
caccccatccacatccagcctcagccgcagtccaccgctgccaccatcacctcctcctcc
aacaggagccctgctccctctgccgccgcaacctcctttgacggctcaggtagcggggag
ccaagcggggatgaccagaccgaagaagaggaggagcaggaagaggaagcaggtagcggt
gtcccaacagaggccagtggggcagaggaacctgtcggtcccacgttggcaagcaccact
gtacccacagctgaagacaggtcatcctgtgacaacacagagttcggctgctgccccgat
ggcaagacaccgtccagcactccagagggcgccaactgcccctccaccatgaggttcagc
ggtttcctacacttggaccaggttgagggccaggagattttctacacccccgagatggag
gaccccaagtcggagctgtttggagagacggcccgtagcatagagagtgctctcaatgag
ttgttcaggaagtcagaggtgcgcaaagactttatgagcgtccgtgtccggagcctggca
cccagcaactccatcctggcctttgtggaggcccacttcaaaccagatacaagatacaca
gtggaggacatcgaaggagccctgcttaaacagctgaaggcctctaaagagaccagcatt
gccgtgaagaagccagaggacgagaatattcgcttcaccaattatggcctctcctccatt
cccgtcttcaccactactaccaccaccacggcatcggtcaccacagctgctcccaccacc
accaggcctccgcaaaccaccccatacgtcacccgcaggccttacaacggcagacgtacg
accacaacctccgcgccagtcaccacaccaccaccacccaccaccaccaccaccaggcct
ccgccaaccaccccgtatgtcacccgcagaccttacaatggcagacgtaccaccaccacc
agcactaccacgaccgcgctgcctccagctaccaccatagcccatgttcggggcaagctt
caccacaaggcccagaagccctgcagctcccacccctgcctccatgggggcacctgcgag
gatgacggcaacgacttcagctgcaagtgccccgctgggagaggaggctccgtgtgtgag
aaggtgatcaggtacttcatcccatcatttgggggccaatcatatttggctttccaaacc
atgagcgcctatcacacggtccgcatcgccatggagttcagagcatcagagatgacgggc
atcctgctctacaatggccaggaaggcaagaaggacttcatctctctggctctggttaac
ggcaaggtggagctcaggttcaacacaggttcaggcacaggcacagtgatcagcaaagtt
aaagtcaatcagggccgctggcatcagttggtggtgacgcgcaaccgccgcaatgcaatg
ctcagcgtggacaacgagccacacatcgagggcgagagtccacgcggcacagacggcctt
aacctcgacacccacctgttcatcgggggagtgcctgaggaaattaagctggatgtgagg
gaaaggacagaggtggccacaggtctggtgggctgcatccgcttactggatgtcaacaac
cggctgctcaacctacaggagaacgggggtgacagtctgtatggcagcggcgtgggtgaa
tgtggcaacaacccctgccagccaaatccttgcaagaatggtgctgcatgccaggtcaag
gaggcagagatgttccattgcaagtgcagcaaaggattctggggtccaacttgtgctgat
gtccatgacccatgtgagcccaacaggtgccatccatcctcccagtgccaggcgatgccc
gagggaggctacaaatgcgagtgtcccatgggacgtgaagggaggcactgcgagaaagtg
gctgagaggagaggggcttacatgccactattcaacggagactcttacctggagctgaag
gggctccatctctacgggcatgatctgcgtcaaaaggtcagcgtgacagtgattctcatg
gccaatgactccaacggtttgatcttctacaatggccaaaaatcggacggaaagggagac
ttcatctctctgtcactcaatgaagggatcctggagttccgctacgatctggggaaggga
ccagccaccatcaggagtaaggaaccaatccagctgaacgtgtggaacaccatcagcctg
gagcgctccaaccgcaaaggagaaatcatggtgaacaagaaagaccctgtcagaggagag
gcaccgaacctgcatgtagatcttaacctcaaagagtctctttttgttggcggagctcct
gattacagccgactagcaagagtcgctgcactcacggatggcttcaagggaacaatccaa
aagatcattctgatgggtacccccatcctcagagaggagaacgccctgcgctccagcaac
atagccatgttccaggaccacccgtgttcccatgagccctgccacaacggcggccgctgc
aaccccatgctggacacctatgagtgtgtttgcctcagtggtttctcagggggacactgt
cagaacaccatctacgagaagtctgctggagagaccgaggccattgcctttgacgggcgg
acgttcatcgagtaccacaacgccgttacaaagagtgagaaagctctgctggtgaacaaa
tttgagctgagcatccgaacagaggcgacccaaggcctggtgctgtggagcggaaagggc
gtggagcgctctgactacatcgccctggccattgtggatggacacgtccagatgacatat
gacttgggctccaagcctgtggtgctgcgctcctccgtgcgcgtcgacaccaaccgctgg
atacgcatcaaggctagcagagcacttagagacggttctctacaggttggcaatgaggca
gcggtaacagggtcatcgcctttggcagcaacacagctggacacagacggagcactgtgg
ttgggtggtctggaggagctggcggtggcccgtcggttgcctaaggcctacagcaccggc
tttgttggttgcatcaaggacgtggtggtggacggtgtggagcttcacctggtggaagac
gccttaaacagccccaaaatattacactgtcccgccgccaaataa
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integrated database retrieval system
