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Homo sapiens (human): 27072
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Entry
27072 CDS
T01001
Symbol
VPS41, HVPS41, HVSP41, SCAR29, hVps41p
Name
(RefSeq) VPS41 subunit of HOPS complex
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
hsa
Homo sapiens (human)
Pathway
hsa04140
Autophagy - animal
hsa04148
Efferocytosis
hsa05132
Salmonella infection
Network
nt06181
Salmonella
nt06532
Autophagy
Element
N01300
Tethering of late endosomes and lysosomes
N01301
Salmonella SifA to Tethering of late endosomes and lysosomes
N01721
Autophagosome and lysosome fusion, tethering factor
Disease
H01891
Autosomal recessive spinocerebellar ataxias
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
27072 (VPS41)
04148 Efferocytosis
27072 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
27072 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsa04131
]
27072 (VPS41)
Membrane trafficking [BR:
hsa04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
27072 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
ANAPC4_WD40
Vps39_2
Vps39_1
zf-RING_5
Frtz
RIG-I_C
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
27072
NCBI-ProteinID:
NP_055211
OMIM:
605485
HGNC:
12713
Ensembl:
ENSG00000006715
UniProt:
P49754
LinkDB
All DBs
Position
7:complement(38722974..38909191)
Genome browser
AA seq
854 aa
AA seq
DB search
MAEAEEQETGSLEESTDESEEEESEEEPKLKYERLSNGVTEILQKDAASCMTVHDKFLAL
GTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSGEEFH
ETFDCPIKIIAVHPHFVRSSCKQFVTGGKKLLLFERSWMNRWKSAVLHEGEGNIRSVKWR
GHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKV
CSVKERHASEMRDLPSRYVEIVSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCA
RPRLDIIQPLSETCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIVSPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILDIGLAYINHLVERGDYDIAARKCQK
ILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIYEMILHEFLESDYEGFATLI
REWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKTLAELYTYDKNYGNALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIKKVVEELEDRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPILPSDAAKPFSVVVFHCRHMFHKECLPMPSMNSAAQFCNICSA
KNRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagaggagcaggaaactgggtcccttgaagaatctacagatgagtctgag
gaagaagagagcgaagaggaacccaagctgaagtatgaaaggctttccaatggggtaact
gaaatacttcagaaggatgcagctagctgcatgacagtccatgacaagtttttggcattg
ggcacacattatggcaaggtttatttacttgatgtccaggggaacatcactcagaagttt
gatgtaagtcctgtgaagataaatcagattagcttggatgaaagtggagagcacatgggt
gtgtgttcagaggatggcaaggtgcaggtatttggactgtattctggagaagaatttcac
gagacttttgactgtcccattaaaattattgctgtgcacccacatttcgtgagatccagt
tgcaagcagtttgtgaccggagggaagaagctgctactgtttgaacggtcttggatgaac
agatggaagtctgctgttctgcatgaaggggaagggaacataaggagtgtgaagtggaga
ggccatctgattgcttgggccaataatatgggtgtgaagatttttgacatcatctcaaag
caaagaatcaccaatgtgccccgggatgatataagtcttcgcccagacatgtatccctgc
agcctctgctggaaggacaatgtgacactgattattggctgggggacttctgtcaaggtg
tgctcagtgaaggaacggcatgccagtgaaatgagggatttgccaagtcgatatgttgaa
atagtgtctcagtttgaaactgaattctacatcagtggacttgcacctctctgtgatcag
cttgttgtactttcgtatgtaaaggagatttcagaaaaaacggaaagagaatactgtgcc
aggcctagactggacatcatccagccactttctgagacttgtgaagagatctcttctgat
gctttgacagtcagaggctttcaggagaatgaatgtagagattatcatttagaatactct
gaaggggaatcacttttttacatcgtgagtccgagagatgttgtagtggccaaggaacga
gaccaagatgatcacattgactggctccttgaaaagaagaaatatgaagaagcattgatg
gcagctgaaattagccaaaaaaatattaaaagacataagattctggatattggcttggca
tatataaatcacctggtggagagaggagactatgacatagcagcacgcaaatgccagaaa
attcttgggaaaaatgcagcactctgggaatatgaagtttataaatttaaagaaattgga
cagcttaaggctattagtccttatttgccaagaggtgatccagttctgaaaccactcatc
tatgaaatgatcttacatgaatttttggagagtgattatgagggttttgccacattgatc
cgagaatggcctggagatctgtataataattcagtcatagttcaagcagttcgggatcat
ttgaagaaagatagtcagaacaagactttacttaaaaccctggcagaattgtacacctat
gacaagaactatggcaatgctctggaaatatacttaacattaagacataaagacgttttt
cagttgatccacaagcataatcttttcagttctatcaaggataaaattgttttattaatg
gattttgattcagagaaagctgttgacatgcttttggacaatgaagataaaatttcaatt
aaaaaggtagtggaagaattggaagacagaccagagctacagcatgtgtatttgcataag
cttttcaagagagaccaccataaggggcagcgttaccatgaaaaacagatcagtctttat
gctgaatatgatcgaccaaacttacttccctttctccgagacagtacccattgcccactt
gaaaaggctcttgagatctgtcaacagagaaactttgtagaagagacagtttatcttctg
agccgaatgggtaatagccgaagtgccctgaagatgattatggaggaattacatgatgtt
gataaagcaatcgaatttgccaaggagcaagatgatggagagctgtgggaagatttgatt
ttatattccattgacaaaccaccatttattactggcttgttaaacaacattggcacacat
gttgacccaattctactgattcaccgtattaaggaaggaatggagatccccaatttgaga
gattccttggttaaaattctgcaagactacaatttgcaaattctgcttcgtgaaggctgc
aagaagattctcgtagctgactctttgtccttactgaagaaaatgcaccgaactcaaatg
aaaggtgttcttgttgatgaggagaacatctgtgagtcgtgcctttcccctattcttcca
tcagatgcagctaagcccttcagcgtggtggtcttccattgccggcacatgttccacaag
gagtgcctgcccatgcccagcatgaactctgctgcacagttctgcaacatctgcagtgct
aagaaccgtggaccaggaagtgcaattttggagatgaaaaaatag
DBGET
integrated database retrieval system