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Mesocricetus auratus (golden hamster): 101843265
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Entry
101843265 CDS
T08306
Symbol
Scn9a
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X1
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
maua
Mesocricetus auratus (golden hamster)
Pathway
maua04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
maua00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
101843265 (Scn9a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
maua04040
]
101843265 (Scn9a)
Ion channels [BR:
maua04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
101843265 (Scn9a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
Lustrin_cystein
DUF6739
Motif
Other DBs
NCBI-GeneID:
101843265
NCBI-ProteinID:
XP_040601425
LinkDB
All DBs
Position
Unknown
AA seq
1985 aa
AA seq
DB search
MAMLPPPGPQSFVYFTRQSLALIEQRISEEKAKEHKDEKKEDDEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYVDKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHSLFSMLIMCTILTNCIFMTMSNPPEWTKNVEYTFTGIYTFESLIKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKELEENETLESIMNTVESEEELK
KYFYYLEGTKDALLCGFSTDSGQCPEGYECVKAGRNPDYGYTSFDTFSWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKE
LEFQQMLDRLKKEQEEAEAIAAAAAEYTSIGRSRTMGISESSSEASRLSSKSAKERRNRR
KKKNQKKISSGEEKGDDEKLSKSESEESIRKKSFHLGVEGHHRVREKRLSTPNQSPLSIR
GSLFSARRNSRTSLFSFRGRGRDLGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSS
NISQASRSPQMLSVNGKMHSAVDCNGVVSLVDGPSALMVPNGQLLPEVIIDKATSDDSGT
TNQMRKKRLSSSYFLSEDMLNDPHLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHT
FLIWNCSPYWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTDEFKNVLAVGN
LIFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIN
EDCILPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVL
NLFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKRGINYVKRTLREFILKAFSKKPKG
SKDTKRTVDPNNKKENYISNRTLAEMSKDHKEKDKMSGFGSSIDKSFMDENDYQSFIHNP
SLTVTVPIAPGESDLENMNTEELSSDSDSDYSKERRNRSSSSECSTVDNPLPGEGEEAEA
ESVNADEPEACFTDGCVRRFPCCQVNVDSGKGKVWWTIRKTCYRIVEHSWFESFIVLMIL
LSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWLDF
LIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMN
VLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGSRFPTTQVANRSECFALMNVSGNVRWK
NLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVNEQPKYEYSLYMYIYFVIFIIF
GSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNK
FQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQSQYMTDVLYWINMVFIILFTGECV
LKLISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRL
IKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFET
FGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKIHPGSSVEGDCGNPSVGIFYFVSY
IIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFCKLS
DFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRSQM
EERFMSANPSKVSYEPITTTLKRKQEDVSATIIQRAYRRYRLRQNVKNISSIYIKDGDRD
DDLPNKEDIVFDNVNENSSPEKTDATASAISPPSYDSVTKPDQEKYETDETEKEDKRKDG
KESRE
NT seq
5958 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgctgcctcctccaggacctcagagctttgtctacttcacaagacagtctctt
gccctcattgagcaacgcatttctgaagaaaaagccaaggaacacaaagatgaaaagaaa
gaagatgatgaagaaggtcccaagcccagcagtgacttggaagctggtaaacagctgccc
ttcatctatggagacattccccctgggatggtgtcagagcccctggaggacctggaccct
tactatgtggacaagaaaacttttatagtattgaacaaagggaaagcaattttccgtttc
aacgccactcctgctttgtacatgctgtcccccttcagtcctctaagaagaatatctatt
aagattttagtgcattccttattcagcatgctgatcatgtgcaccattctgacgaactgc
atattcatgaccatgagcaatcctccagaatggaccaaaaatgtagaatacacttttact
gggatatatacttttgaatcactcataaaaatccttgcaagaggcttttgtgtgggagaa
ttcaccttcctccgtgacccttggaactggctggattttattgtcattgtttttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtcttgaga
gctttgaaaactatttctgtaatcccaggcctgaagaccatcgtgggggccctgatccag
tcggtgaagaagctatctgatgtcatgatcctcactgtgttctgtctcagtgtctttgct
ctaatcgggctgcagctgttcatgggaaacctaaagcataaatgtttcaggaaggaactg
gaagagaatgaaacattagaaagcatcatgaatactgttgagagtgaagaagaattgaaa
aagtatttttattacttggagggaaccaaagatgctctcctttgtggtttcagcacagat
tctggtcagtgtccagaagggtatgagtgtgtgaaggctggcagaaaccctgattatggc
tacacgagctttgacactttcagctgggcctttttggccttgtttcggctaatgactcaa
gactactgggagaacctttaccaacagactctacgtgctgctggcaaaacctatatgatt
ttctttgtcgtggtaatttttctgggctcattttacctgataaacttgatcctggctgtg
gtagccatggcatatgaggaacagaaccaagccaacatcgaggaagctaaacagaaagaa
ctagaatttcagcagatgttagaccgactcaaaaaagagcaggaagaagctgaggcgatc
gctgcagctgctgctgagtacactagtattgggcgtagcaggacgatgggtatctcggaa
agttcgtcagaagcctccaggctaagctcaaagagtgccaaggaaagaagaaacagaaga
aagaaaaagaaccagaagaagatctccagtggcgaggaaaagggcgatgatgagaaactg
tccaagtcagagtcagaggaaagcattcgaaagaaaagtttccatctcggcgtggaagga
caccaccgcgtccgggagaagaggctgtccacacctaaccagtcaccactcagcattcgc
ggctccttgttttccgcaaggcgcaacagcagaacgagtctcttcagtttcaggggtcga
ggaagagatctaggatctgagaccgaattcgctgatgatgagcatagcatttttggagat
aatgagagcagacgaggttcactatttgtgcctcacagaccccgggaacgacgcagtagt
aacatcagccaggccagtaggtccccccaaatgctgtcggtgaatgggaagatgcacagt
gcggtggactgcaatggcgtggtgtcgcttgtggatggaccttcagccctcatggtcccc
aatggacagcttcttccagaggtgataatagataaggcaacttccgacgacagcggtaca
accaatcaaatgcgcaaaaaaagactctccagttcttacttcctgtctgaggacatgttg
aatgacccgcatctcaggcaaagagcaatgagcagagcaagcattctaaccaacactgta
gaagaacttgaggagtctagacaaaaatgtccaccgtggtggtacagattcgctcacaca
tttttaatctggaattgctctccatattggataaaattcaaaaagttcatctattttatt
gtaatggatccttttgtagatcttgcaattaccatttgcatagttctaaacacgttattt
atggctatggagcatcacccaatgactgatgagttcaaaaatgtgcttgcagtggggaac
ctgatatttacaggaatcttcgcagctgaaatggtactgaagttaatagccatggatcct
tatgagtattttcaagtaggctggaatatttttgacagcctaattgtaacgttaagtttg
gttgagcttttcctagcagatgtggagggattatcagtcctgcggtcattcagactgctg
cgagtattcaagttggcaaaatcctggcccacgctgaatatgctcattaagataattggc
aattcggtgggcgcactgggaaacctgaccctggtgttggccatcatcgtcttcattttt
gccgtggtcggcatgcagctgtttggaaagagctacaaggagtgtgtctgcaagatcaac
gaggattgcatactcccacgctggcacatgaatgacttctttcactccttcctgattgta
ttccgagtgctgtgtggagagtggatagagaccatgtgggactgcatggaggtcgcaggc
caagccatgtgccttattgtctacatgatggtcatggtgattggcaaccttgtggtcctg
aacctgtttctggctttattactgagttcatttagttctgacaatcttacagcaattgaa
gaagacaccgatgcaaacaacctccagattgcagtggccagaattaaaagaggaataaat
tatgtaaaacggaccttacgtgaatttatcctaaaagcattttccaaaaaaccaaagggc
tccaaggatacaaaacgaacggtagatccaaacaacaaaaaagaaaactatatctcaaac
cgtacacttgctgagatgagcaaagatcacaaagaaaaggataaaatgagtggctttggg
agcagtatagacaagagctttatggatgaaaatgattaccagtcctttattcataatccc
agcctcacagtgacagtgccaattgcacctggggaatctgatttggaaaatatgaacact
gaagaacttagtagtgactcagatagcgactacagcaaagagagacggaaccgatcaagt
tcctcggagtgtagcacagttgataaccctctgccgggagaaggagaagaagcagaagct
gagtctgtaaatgcggatgagccagaggcatgttttacggacggttgtgtgcggagattt
ccatgctgccaagttaacgtagactccgggaaagggaaagtctggtggactatcaggaag
acctgctacaggatagttgaacacagctggtttgaaagctttatcgttctcatgatcctg
ctcagcagcggagctctggcttttgaagatatatacattgaaaagaaaaagaccattaaa
attatcctggagtatgctgacaagatattcacctacatcttcattttggaaatgcttcta
aaatgggtggcatatgggtataaaacctatttcactaacgcctggtgttggctggacttc
ttaattgttgatgtgtctctggttactttggtagccaacactcttggctactcagacctt
ggtcccattaaatccctgcgaacactgagagcactaaggcccctaagagccttgtctaga
tttgaaggaatgagggtggtggtcaatgcactcataggagcaatcccttccatcatgaat
gtgcttcttgtatgccttatattctggctaatatttagcatcatgggtgtcaacctgttt
gctggaaagttctacgagtgtgttaacactaccgacgggtcacgatttcctacaactcaa
gttgcaaaccgttctgagtgttttgcccttatgaatgttagtggaaacgttcgatggaaa
aatttgaaagtgaactttgacaatgttgggcttggttacctgtcactgcttcaagttgca
acatttaaaggctggatggacattatgtatgcagctgttgactctgttaatgtaaatgag
cagccgaaatatgaatacagcctctacatgtatatttattttgtcatctttatcatcttt
gggtccttcttcactttgaacttgttcattggtgtcatcatagataatttcaaccaacag
aaaaagaagcttggaggtcaagacatctttatgacagaagaacagaagaaatactataat
gcaatgaagaagctgggatctaagaaaccacaaaaaccaattcctagaccagggaacaaa
ttccaaggatgtatatttgacttagtgacaaatcaagctttcgatatcactatcatggtt
cttatttgcctcaacatggtaactatgatggtggaaaaagaaggtcaaagtcagtacatg
actgatgttttgtattggatcaacatggtcttcattatcctgttcactggggagtgcgta
ctgaagttgatctctctcagacattactacttcactgtgggatggaacatctttgatttt
gtggtagtgatcctctccattgtaggaatgtttctcgccgagatgatagagaagtatttt
gtgtctcctaccctcttccgagtcatccgcctggccaggatcggccggatcctacgcctg
atcaaaggcgccaaggggatccgcaccctgctctttgctctgatgatgtctctccccgcg
ctgttcaacatcggcctcctgcttttcctggtcatgttcatctacgccatctttgggatg
tccaactttgcctatgttaagaaggaagctggaattaatgacatgttcaactttgagacc
tttggcaacagcatgatctgcctgttccaaatcaccacttccgcaggctgggatgggctg
ctggctcctatcctcaacagtgcccctccagactgtgacccaaaaaaaattcatccagga
agttcagtggaaggagactgtgggaacccgtctgtggggattttctactttgtcagctac
atcatcatatccttcctggttgtggtaaacatgtacatcgctgtcatcctggagaacttc
agcgttgccactgaagaaagtactgaacccctgagtgaggacgactttgagatgttctat
gaggtctgggagaagttcgaccctgatgccactcagttcatagagttctgcaagctgtcg
gactttgcggctgccctggatcctccccttctcatcgcaaagccaaacaaagtccagctc
attgccatggatctgcccatggtgagtggagaccgcatccactgcctggacatcttattt
gcttttacaaagcgggtactgggtgagagtggagagatggattctcttcgttcgcagatg
gaagaaaggtttatgtctgcaaatccttctaaagtgtcctatgaacctattacaaccaca
ctaaaacgaaaacaagaggatgtatctgctactatcattcagcgtgcttacagaaggtac
cgccttcgacaaaacgtcaagaacatatcaagtatatacataaaagatggagatagggat
gatgacttgcccaataaagaagatatagtttttgataacgttaacgagaactcaagtcca
gaaaagacagatgcaactgcctctgccatctctccaccttcgtatgacagtgtcacaaag
ccagatcaagagaaatatgaaacagatgaaacagagaaggaagacaagaggaaagatgga
aaagaaagcagggaatag
DBGET
integrated database retrieval system
