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Malus domestica (apple): 103446959
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Entry
103446959 CDS
T03194
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein NUP214
KO
K14317
nuclear pore complex protein Nup214
Organism
mdm
Malus domestica (apple)
Pathway
mdm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103446959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103446959
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103446959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
103446959
NCBI-ProteinID:
XP_028943604
LinkDB
All DBs
Position
11:137585..150323
Genome browser
AA seq
1763 aa
AA seq
DB search
MTDSGKVTRVEEEVEGEHVESADYIFKRIGDPLPITPHDSSFDPRGSPSRPLAVSEKHGL
VFVAHSSGFCVARTKDIMASAAEMEEKGSYSSVQELSIVDVPLPNIHILALSTDGSTLAA
TVDADIHFFSVESLLHKGLKPSLSCSLNESNSIKDMQWTRKPENLYVVLSDLGKLSHGSV
GGLMEDVMDNVDAGATNACFDLCFVKVGWSSKGNLIVVARKDNISILSSNFEERSSMLIS
FKPWDEDSDENCIVKVDSIRWVRHDSIILGCFQLTAQGNEKGYLVQVIKVKDGKFTDDSC
KPVVISFYDLFSNVIDDILPSASGPYLLLSYLEQCELAIVANRKNVDEHIVYLSWSLGEE
KNEVVVVDIFQDSLLPRIELQDNGDDNLILGLSVDKVSISKKISVRFGEEHKELSPFCVL
MCLTLEGKLIMFHVASVSRITASPAVVSSLSDGEEDSTALVPVESESTKPSFQLGKEQFE
KASMDVPLVNESRKELDRKVGLDVHVKDDLKSLNANETVMPGLLTQILNKEITSYKEVEP
LKNTQSFKAEGKQEVIVPKLHEDVDGNQIQLPGLGNRNTEQASTNASLQEGPSYVFRDFS
KTEAKNIEGRGTGSVSFGGNIAADAAIKSNSNDTRNNFGMGTESPGKIESAGFQSVSSQS
RFGGKIVSSKDTDVKSPLITSTSIQGSRSGNASQTVAASGAHGKHFGKPINFKDVSGKPT
SVNSSDRLGEIGKWRPSAATGNIVSVPSISSSQTLSHGSFSFANSPNQSRMPNSEPNLSK
QFGNIKEMTKELDMLLQSIEGAGGFRDACTVNQKGSVEELERGIETLSDRCRLWKSIMDE
RLREIQHLLDTTVQVLARKIYMEGIVKQASDRRYWDFWNCQKLSSELELKRRHILKMNQD
LTDQLIQLERHFNGLELNKFGENAGARAGGRALQSRFGPPRHIQSLHSLHSTMTSQLAAA
DQLSECLSKQMAALKIESPSVKKQNVKKELFETIGIPYDASFSSPSRTPNEKLSFSFGSA
ASKDQPRRNVNAIKNYEPETARRRRDSLDRSWESYEPTKATVKRLLLKESGKESINRSSF
PIDKQQLSPCLLEGSAVTRPRDHTSPTSFLHPSVNKSGIQGTQPKQAFESSATPFVWASD
LPGPFQPTGLKSLTQEHKMLATSQVFPAARQNFTRETSMTAERSGDGMAYIGKYDSVPMK
EKPVLPSDTTQKPSFSKVSTQTPSLQKRQNDMLNAYAKDTALPPKESVKDGPLTTRMAST
EAGKKHDFPFSPSFSVPVIPSEPGKFAQTDAATNKSQTVKMPPPTTFLMSVSAPSSPIIS
SSSAPLSSSSIPQSVAPTFSSAMPLNKSLASSVTAADESKPVSSTSESPKTEIQPPSKPD
MNANTTSPRMEFGPSTVEGNLELKPSVSSPPSIETSTGLSTGDDPSLIKASPAAVEASGS
QTGMNETAGPKQNVTVNDQQDQPSAGHSPFPNLPTTSGSVTGGIDGLDLQNAEEDDMDEE
TPDASRVSELSLGSLGGFGLGSGPKPNPFGGSFGNAKCTTNATSPFSRPVASGELFQPAS
FNFQSLQPSQSSQPANSGAFAGGFGTSTTAQAPIPSGFGQPAQVGPGQQALGSVLGAFGQ
SRQIGTSLPGTGFGSPGGFGGGIAGITPTGSFTSAATGGFAGAASGGGGFASLASGGGGS
AVAASGGSGFAAAASGGGGFSGAVSGGVGFAGAAFGGGGFGGAASGGGGFGAFGGQQGSG
SFSAFGGVGGTGKPPELFTQMRK
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagtgggaaagtgactcgagtggaagaagaagttgaaggagagcatgtggag
tcggccgactacattttcaaaaggatcggcgaccccctcccaatcacgcctcatgattcc
agtttcgatccccgaggcagcccctcccggcccctcgccgtctccgagaaacacggcctc
gtcttcgtcgcccattcctctgggttttgcgttgcgaggaccaaagatattatggcttcg
gccgccgagatggaggaaaagggaagctattcttctgtacaggaactgagtattgtggat
gttccccttcccaacatacacattctcgcactctctaccgacggctctactctcgcagct
accgtagatgcagacattcacttcttctctgtcgaatcacttctccataagggtctcaaa
ccatcattatcttgttcactcaatgaatccaactctatcaaggatatgcagtggacaagg
aaacctgaaaacctttatgtggtcctttcggatcttgggaagttatctcatggatcggtt
ggtggccttatggaagatgtaatggacaatgttgatgctggtgcaactaatgcttgtttt
gacctgtgttttgtcaaagttggatggagttctaaaggaaacttaattgtcgtggcaaga
aaggataatatcagcattctatcatctaactttgaggagaggtcatctatgttaatttcg
ttcaaaccctgggatgaagattctgatgaaaactgcattgtaaaagtggattctatcagg
tgggtacgccatgatagcatcattctaggatgctttcaactgactgctcagggcaatgaa
aaaggttaccttgttcaagtaataaaagtcaaggatggcaaatttactgatgattcttgc
aagccagttgtgatatctttctatgatttgttttcaaatgtcattgatgacattctgccc
tctgcaagtggaccatacttgttattgagctatctggagcaatgtgaacttgcaattgtc
gctaacaggaagaatgtggacgagcatattgtgtatctcagttggtcgctaggagaggag
aagaatgaagttgtagttgttgatattttccaagatagtttgctaccaaggattgagctt
caagataatggtgatgataatttgattctggggctctcagtagataaagtttcaataagt
aaaaagattagtgtacggtttggagaggaacacaaagaactctcaccattttgtgttctg
atgtgtcttacgctagagggaaaactgattatgtttcatgttgccagtgtcagccgcatt
acagcctcacctgctgttgtttcctccctttctgatggtgaggaggattccactgcattg
gtacctgtagaaagtgaatcaactaaaccttctttccagctggggaaggaacaatttgaa
aaggcttctatggatgttccattggttaatgagagcagaaaagaacttgacagaaaagta
ggtcttgatgtccatgtgaaagatgacttgaaatctcttaacgcgaatgagacagtgatg
cctggacttcttactcaaatactcaataaagaaattactagttacaaggaagtggagccc
ctgaaaaacactcaatcatttaaagctgaagggaaacaagaagttattgtcccaaagcta
cacgaagacgtagatggaaaccaaatacagcttcctggactgggaaacagaaatactgag
caagcatctaccaacgcttctcttcaagaagggcctagttatgtgttcagggactttagc
aagacggaggctaaaaatattgaaggacgaggaactggcagtgtctcttttggtggtaac
attgctgctgatgctgctataaaatcaaattcaaatgatacacgtaataattttgggatg
gggacagaatctcctggaaaaattgagtcagcgggtttccaaagtgtttcatctcagtca
cggtttggtggaaaaatcgtatcttcaaaggacactgacgtgaaatcaccactcataact
tcaacttctattcaaggcagcaggtctggaaatgctagccaaactgttgctgcttcaggt
gctcatgggaaacattttggaaaacctattaatttcaaggatgtctctggtaaacctact
tcagtcaactcttctgataggcttggggagattggcaaatggagaccatcagcggcgact
ggaaatattgtgtcagtgccttccatttcaagctcccaaaccttatcacatggaagtttt
tcctttgcgaattctcccaaccagtcaaggatgccaaactccgaaccaaatttatcaaaa
caatttggcaatatcaaagagatgaccaaggagttggatatgcttctgcaatctatagag
ggagcaggtggtttcagggatgcctgcaccgttaatcagaaagggtcagttgaagaattg
gagagaggcatagagactctgtctgacagatgccgactgtggaagagcattatggatgaa
cgacttcgagaaatacaacatctgcttgacacaaccgtacaagtattggcaaggaaaata
tacatggagggcattgtgaagcaagcttctgatagacgatactgggacttctggaattgc
cagaaattgagttcagaacttgagcttaagcggcggcatattttaaaaatgaaccaggat
ttgactgaccaattaattcagttagaaaggcattttaatggccttgaactcaataaattt
ggtgaaaatgctggagctcgtgctggtggaagagccttgcagagtcgatttgggccccca
agacacattcagtccttgcatagtttacatagcacaatgacgtcacaattagccgccgct
gatcaactttctgagtgcctttcaaaacaaatggcagcactgaagatagagtcaccttct
gtaaagaagcagaatgtaaaaaaagagttgtttgaaacaatagggattccctatgatgcc
tccttcagttccccttcacgtactccaaatgaaaaactatcattttcttttggttctgct
gcttctaaagatcagcccaggagaaatgttaatgccataaaaaattatgaaccagaaact
gcaaggaggaggagagactcactggataggagctgggaaagttatgagcctacaaaagca
actgtgaaaaggttgcttttgaaagagagtggcaaggaaagcattaatagatcatcattt
cccattgataagcaacagttaagtccttgcctgctggagggatcagcagttactcgccca
agggaccacacaagccctacatccttcttgcatccatccgtaaacaaatcaggtattcag
ggtacacaaccgaaacaggcttttgagagctcagcaacgccatttgtttgggctagtgat
cttccgggaccattccaacctactgggctgaagtctcttacgcaagaacacaaaatgtta
gcaacatcccaagtattccctgcagccaggcaaaattttacaagggaaactagcatgaca
gctgaaagatctggcgatggcatggcatatattgggaagtatgattcagttcctatgaag
gaaaagcctgtcttaccatcagacactactcagaaaccatcattttctaaggtatctaca
cagacaccatctttgcagaagagacagaatgatatgctaaatgcatatgctaaagatact
gcacttccaccaaaagaaagtgtgaaggatgggcctttaaccacaagaatggcatctact
gaagctgggaaaaaacatgactttccattttctccctcattttctgttcctgtgattcct
agcgagcctggaaagtttgcccagaccgatgctgcaacaaataaaagccagactgttaaa
atgccaccacctaccacattcttaatgtcagtttctgcaccctcatctccaataattagt
tcatcatcggctcctctatcttcgtcatcaattccgcaatcagttgcaccaaccttttcc
tcagcgatgcccttaaacaaatcattggctagttctgtcactgctgcagatgaaagcaaa
cctgtgagttcaacatcagaatctccaaagacagagatccaaccaccttcaaaaccagac
atgaatgctaatactacatcaccacgcatggaatttgggccttccacggttgaaggtaat
ttggagcttaaaccttcagtgtcatctccaccctcaattgagacttcaacaggactgtca
actggagacgatccgagtcttatcaaggctagtcctgcagcagtagaggcatctgggagc
cagaccgggatgaacgaaactgcaggccctaaacagaatgtaacagtcaatgatcaacaa
gatcagccatctgctgggcattctccatttccaaatctacctacaacgtcagggagtgtt
actggtgggattgatggcttggatttacaaaatgcagaggaggatgacatggatgaggag
actccggacgcaagtagagtaagtgaacttagtttgggaagccttggtgggtttgggctt
ggctctggtcctaaacccaatccatttggtggatcatttggcaatgcaaaatgcacaaca
aatgcgacttctcctttctccaggcctgttgctagtggagagttatttcagcctgcctcc
tttaacttccaatctctacagccttcccaatcatctcagccagcaaattcaggtgcattt
gctggtggctttggcaccagtactactgcccaagctcccattccgagtgggtttggccag
ccagcacaggttggaccagggcagcaagcattagggtcagttcttggtgcttttggacag
tcaagacagattggtactagtctaccaggtactggttttggatcacccggtggttttggt
ggtggcattgctggcattactcccaccggtagcttcacaagtgctgctaccggagggttt
gctggtgctgcttctggtggtggtggatttgctagtttggcttcaggtggcggtggttct
gctgttgcggcttcaggtggtagtggttttgctgctgcagcttcgggcggtggtggattt
tcgggtgcagtttcaggcggcgtgggatttgctggtgcagctttcggtggagggggcttt
ggtggtgcagcttcaggtggtggtggatttggggcatttggtggccaacaaggatctggc
agtttctctgcttttggtggtgtaggaggaacgggaaagccaccggagttgttcacacag
atgaggaagtaa
DBGET
integrated database retrieval system