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Malus sylvestris (European crab apple): 126589366
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Entry
126589366 CDS
T09027
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
msyl
Malus sylvestris (European crab apple)
Pathway
msyl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
msyl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126589366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
msyl03019
]
126589366
Messenger RNA biogenesis [BR:
msyl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126589366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
126589366
NCBI-ProteinID:
XP_050110594
LinkDB
All DBs
Position
11:127627..140258
Genome browser
AA seq
1803 aa
AA seq
DB search
MTDSGKVTRVEEEVEGEHVESADYIFKRIGDPLPITPHDSSFDPRGSPSRPLAVSEKHGL
VFVAHSSGFCVARTKDIMASAAEMEEKGSYSSVQELSIVDVPLPNIHILALSTDGSTLAA
TVDADIHFFSVESLLHKGLKPSLSCSLNESNSIKDMQWTRKPENLYVVLSDLGKLSHGSV
GGLMEDVMDNVDAGATNACFDLCFVIVGWSSKGNLIVVARKDNISILSSNFEERSSMLIS
FKPWDEDSDENCIVKVDSIRWVRHDSIILGCFQLTAQGNEKGYLVQVIKVKDGKFTDDSC
KPVVISFYDLFSNVIDDILPSASGPYLLLSYLEQCELAIVANRKNVDEHIVYLSWSLGEE
KNEVVVVDIFQDSLLPRIELQDNGDDNLILGLSVDKVSISKKISVRFGEEHKELSPFCVL
MCLTLEGKLIMFHVASVSRITASPAVVSSLSDGEEDSTALVPVESESTKPSFQLGKEQFE
KASMDVPLVNESRKELDRKVGLDVHVKDDLKSLNANETVMPGLLTQILNKEITSYKEVEP
LKNTQSFKAEGKQEVIVPKLHEDVDGNQIQLPGLGNRNTEQASTNASLQEGPSYVFRDFS
KTEAKNIEGRGTGSVSFGGNIAADAAIKSNSNDTRNNFGMGTESPGKIESAGFQSVSSQS
RFGGKIVSSKDTDVKSPLITSTSIQGSRSGNASQTVAASGAHGKHFGKPINFKDVSGKPT
SVNSSDRLGEIGKWRPSAATGNIVSVPSISSSQTLSHGSFSFANSPNQSRMPNSEPNLSK
QFGNIKEMTKELDMLLQSIEGAGGFRDACTVNQKGSVEELERGIETLSDRCRLWKSIMDE
RLREIQHLLDTTVQVLARKIYMEGIVKQASDRRYWDFWNCQKLSSELELKRRHILKMNQD
LTDQLIQLERHFNGLELNKFGENAGARAGGRALQSRFGPPRHIQSLHSLHSTMTSQLAAA
DQLSECLSKQMAALKIESPSVKKQNVKKELFETIGIPYDASLSSPSRTPNEKLSFSFGSA
ASKDQPRRNVNAIKNYEPETARRRRDSLDRSWESYEPTKATVKRLLLKESGKESINRSSF
PIDKQQLSPCLLEGSAVTRPRDHTSPTSFLHPSVNKSGIQGTQPKQAFESSATPFVWASD
LPGPFQPTGLKSLTQEHKMLATSQVFPAARQNFTRETSMTAERSGDGMAYIGKYDSVPMK
EKPVLPSDTTQKPSFSKVSTQTPSLQKRQNDMLNAYAKDTALPPKESVKDGPLTTRMAST
EAGKKHDFPFSPSFSVPVIPSEPGKFAQTDAATNKSQTVKMPPPTTFLMSVSAPSSPIIS
SSSAPLSSSSIPQSVAPTFSSAMPLNKSLASSVTAADESKPGKPVSTSSSSFFSPFVSSS
SSLSFNVSNSLVSSSTPSPLVSSTSESPKTEIQPPSKPDMNANTTSPRMEFGPSTVEGNL
ELKPSVSSPPSIETSTGLSTGDDPSLIKASPAAVEASGSQTGMNETAGPKQNVTVNDQQD
QPSAGHSPFPNLPTTSGSVTGGIDGLDLQNAEEDDMDEETPDASRVSELSLGSLGGFGLG
SGPKPNPFGGSFGNAQNAQTNATSPFSRPVASGEFFQPASFNFQSLQPSQSSQPANSGAF
AGGFGTSTTAQAPIPSGFGQPTQVGPGQQALGSVLGAFGQSRQIGTSLPGTGFGSPGGFG
GGIAGITPTGSFTSAATGGFAGAASGGGGFASLASGGGGSAVAASGGSGFAAAASGGGGF
SGAVSGGVGFAGAAFGGGGFGGAASGGGGFGAFGGQQGSGSFSAFGGVGGTGKPPELFTQ
MRK
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagtgggaaagtgactcgagtggaagaagaagttgaaggagagcatgtggag
tcggccgactacattttcaaaaggatcggcgaccccctcccaatcacgcctcatgattcc
agtttcgatccccgaggcagcccctcccggcccctcgccgtctccgagaaacacggcctc
gtcttcgtcgcccattcctctgggttttgcgttgcgaggaccaaagatattatggcttcg
gccgccgagatggaggaaaagggaagctattcttctgtacaggaactgagtattgtggat
gttccccttcccaacatacacattctcgcactctctaccgacggctctactctcgcagct
accgtagatgcagacattcacttcttctctgtcgaatcacttctccataagggtctcaaa
ccatcattatcttgttcactcaatgaatccaactctatcaaggatatgcagtggacaagg
aaacctgaaaacctttatgtggtcctttcggatcttgggaagttatctcatggatcggtt
ggtggccttatggaagatgtaatggacaatgttgatgctggtgcaactaatgcttgtttt
gacctgtgttttgtcatagttggatggagttctaaaggaaacttaattgtcgtggcaaga
aaggataatatcagcattctatcatctaactttgaggagaggtcatctatgttaatttcg
ttcaaaccctgggatgaagattctgatgaaaactgcattgtaaaagtggattctatcagg
tgggtacgccatgatagcatcattctaggatgctttcaactgactgctcagggcaatgaa
aaaggttaccttgttcaagtaataaaagtcaaggatggcaaatttactgatgattcttgc
aagccagttgtgatatctttctatgatttgttttcaaatgtcattgatgacattctgccc
tctgcaagtggaccatacttgttattgagctatctggagcaatgtgaacttgcaattgtc
gctaacaggaagaatgtggacgagcatattgtgtatctcagttggtcgctaggagaggag
aagaatgaagttgtagttgttgatattttccaagatagtttgctaccaaggattgagctt
caagataatggtgatgataatttgattctggggctctcagtagataaagtttcaataagt
aaaaagattagtgtacggtttggagaggaacacaaagaactctcaccattttgtgttctg
atgtgtcttacgctagagggaaaactgattatgtttcatgttgccagtgtcagccgcatt
acagcctcacctgctgttgtttcctccctttctgatggtgaggaggattccactgcattg
gtacctgtagaaagtgaatcaactaaaccttctttccagctggggaaggaacaatttgaa
aaggcttctatggatgttccattggttaatgagagcagaaaagaacttgacagaaaagta
ggtcttgatgtccatgtgaaagatgacttgaaatctcttaacgcgaatgagacagtgatg
cctggacttcttactcaaatactcaataaagaaattactagttacaaggaagtggagccc
ctgaaaaacactcaatcatttaaagctgaagggaaacaagaagttattgtcccaaagcta
cacgaagacgtagatggaaaccaaatacagcttcctggactgggaaacagaaatactgag
caagcatctaccaacgcttctcttcaagaagggcctagttatgtgttcagggactttagc
aagacggaggctaaaaatattgaaggacgaggaactggcagtgtctcttttggtggtaac
attgctgctgatgctgctataaaatcaaattcaaatgatacacgtaataattttgggatg
gggacagaatctcctggaaaaattgagtcagcgggtttccaaagtgtttcatctcagtca
cggtttggtggaaaaatcgtatcttcaaaggacactgacgtgaaatcaccactcataact
tcaacttctattcaaggcagcaggtctggaaatgctagccaaactgttgctgcttcaggt
gctcatgggaaacattttggaaaacctattaatttcaaggatgtctctggtaaacctact
tcagtcaactcttctgataggcttggggagattggcaaatggagaccatcagcggcgact
ggaaatattgtgtcagtgccttccatttcaagctcccaaaccttatcacatggaagtttt
tcctttgcgaattctcccaaccagtcaaggatgccaaactctgaaccaaatttatcaaaa
caatttggcaatatcaaagagatgaccaaggagttggatatgcttctgcaatctatagag
ggagcaggtggtttcagggatgcctgcaccgttaatcagaaagggtcagttgaagaattg
gagagaggcatagagactctgtctgacagatgccgactgtggaagagcattatggatgaa
cgacttcgagaaatacaacatctgcttgacacaaccgtacaagtattggcaaggaaaata
tacatggagggcattgtgaagcaagcttctgatagacgatactgggacttctggaattgc
cagaaattgagttcagaacttgagcttaagcggcggcatattttaaaaatgaaccaggat
ttgactgaccaattaattcagttagaaaggcattttaatggccttgaactcaataaattt
ggtgaaaatgctggagctcgtgctggtggaagagccttgcagagtcgatttgggccccca
agacacattcagtccttgcatagtttacatagcacaatgacgtcacaattagccgccgct
gatcaactttctgagtgcctttcaaaacaaatggcagcactgaagatagagtcaccttct
gtaaagaagcagaatgtaaaaaaagagttgtttgaaacaatagggattccctatgatgcc
tccttgagttccccttcacgtactccaaatgaaaaactatcattttcttttggttctgct
gcttctaaagatcagcccaggagaaatgttaatgccataaaaaattatgaaccagaaact
gcaaggaggaggagagactcactggataggagctgggaaagttatgagcctacaaaagca
actgtgaaaaggttgcttttgaaagagagtggcaaggaaagcattaatagatcatcattt
cccattgataagcaacagttaagtccttgcctgctggagggatcagcagttactcgccca
agggaccacacaagccctacatccttcttgcatccatccgtaaacaaatcaggtattcag
ggtacacaaccgaaacaggcttttgagagctcagcaacgccatttgtttgggctagtgat
cttccgggaccattccaacctactgggctgaagtctcttacgcaagaacacaaaatgtta
gcaacatcccaagtattccctgcagccaggcaaaattttacaagggaaactagcatgaca
gctgaaagatctggcgatggcatggcatatattgggaagtatgattcagttcctatgaag
gaaaagcctgtcttaccatcagacactactcagaaaccatcattttctaaggtatctaca
cagacaccatctttgcagaagagacagaatgatatgctaaatgcatatgctaaagatact
gcacttccaccaaaagaaagtgtgaaggatgggcctttaaccacaagaatggcatctact
gaagctgggaaaaaacatgactttccattttctccctcattttctgttcctgtgattcct
agcgagcctggaaagtttgcccagaccgatgctgcaacaaataaaagccagactgttaaa
atgccaccacctaccacattcttaatgtcagtttctgcaccctcatctccaataattagt
tcatcatcggctcctctatcttcgtcatcaattccgcaatcagttgcaccaaccttttcc
tcagcgatgcccttaaacaaatcattggctagttctgtcactgctgcagatgaaagcaaa
cctggtaaacctgtatcaacatcctcatcatcttttttctccccatttgtttcttcttct
agttctctctcttttaacgtttcaaattcactggtgtcttcatctaccccttcaccttta
gtgagttcaacatcagaatctccaaagacagagatccaaccaccttcaaaaccagacatg
aatgctaatactacatcaccacgcatggaatttgggccttccacggttgaaggtaatttg
gagcttaaaccttcagtgtcatctccaccctcaattgagacttcaacaggactgtcaact
ggagacgatccgagtcttatcaaggctagtcctgcagcagtagaggcatctgggagccag
accgggatgaacgaaactgcaggccctaaacagaatgtaacagtcaatgatcaacaagat
cagccatctgctgggcattctccatttccaaatctacctacaacgtcagggagtgttact
ggtgggattgatggcttggatttacaaaatgcagaggaggatgacatggatgaggagact
ccggacgcaagtagagtaagtgaacttagtttgggaagccttggtgggtttgggcttggc
tctggtcctaaacccaatccatttggtggatcatttggcaatgcacaaaatgcacaaaca
aatgcgacttctcctttctccaggcctgttgctagtggagagttctttcagcctgcctcc
tttaacttccaatctctacagccttcccaatcatctcagccagcaaattcaggtgcattt
gctggtggctttggcaccagtactactgcccaagctcccattccgagtgggtttggccag
ccaacacaggttggaccagggcagcaagcattagggtcagttcttggtgcttttggacag
tcaagacagattggtactagtctaccaggtactggttttggatcacccggtggttttggt
ggtggcattgctggcattactcccaccggtagcttcacaagtgctgctaccggagggttt
gctggtgctgcttctggtggtggtggatttgctagtttggcttcaggtggcggtggttct
gctgttgcggcttcaggtggtagtggttttgctgctgcagcttcgggcggtggtggattt
tcgggtgcagtttcaggcggcgtgggatttgctggtgcagctttcggtggagggggcttt
ggtggtgcagcttcaggtggtggtggatttggggcatttggtggccaacaaggatctggc
agtttctctgcttttggtggtgtaggaggaacgggaaagccaccggagttgttcacacag
atgaggaagtaa
DBGET
integrated database retrieval system