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Musa acuminata (wild Malaysian banana): 103994536
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Entry
103994536 CDS
T03447
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103994536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103994536
04121 Ubiquitin system [BR:
mus04121
]
103994536
03036 Chromosome and associated proteins [BR:
mus03036
]
103994536
03400 DNA repair and recombination proteins [BR:
mus03400
]
103994536
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
103994536
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
103994536
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
103994536
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
103994536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-RING_6
BRCT
zf-HC5HC2H
zf-C3HC4_2
BRCT_2
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-HC5HC2H_2
zf-RING_5
PTCB-BRCT
zf-RING_10
zf-rbx1
RTT107_BRCT_5
Motif
Other DBs
NCBI-GeneID:
103994536
NCBI-ProteinID:
XP_018685928
LinkDB
All DBs
Position
8:complement(10370349..10377047)
Genome browser
AA seq
703 aa
AA seq
DB search
MIDSEDIVQIWSPFLDYLVKLELELKCSICTNLLKVPKVLPCDHVFCSGCISSLIDKGSV
CPSCDLPFLPKDIRLALHVERLVSIFQEMDDAIGTIVQRKASPPGSPGVRISAKKNPVSV
NNHIEAKSIGVQHMPQEKSGHLHSHGSPLTGEGSNKTRHDGENQEIILVGSMNSEQKSGI
VVPLDKGSPNCPSTFSENGDSNLDIHDTYSEHTTKKSPTKTIKADSYASHEVRRPQLSPS
SVTGHPITKDDGKTAVGSSQTRAGVQKQKTSKRQKLNNKRVKNHTIQHVRTPSIVFGDEC
AFCHSFRTTEASGPMCCYKDGRLVAMEEAGQSHVTHAHQKCIEWAPQIYFSGDTVKNLEV
ELRRASKIKCSKCGLKGAALGCYFGSCPKSFHVPCAVEIFDCRWDCVNFHVLCPNHSSEK
LPCDDDGRLEKSSGTTHFPSVQIECRKSSGNLTEHQSSEHHAAAVGVKNDRIFIGSALMD
SEKELLVKFASLVGGTVTEMWRPDVTHVIASTNESSAYGRTHNVLMAILTGKWVLTTKWV
KVCMEAGHFVWEEPYEVRFDMHGFTDGPPMRGRLGAMEKAQKLFAGLSFRLSEHFTLSCR
QSLKELVVTAGGVVLEDDILIPQDPFAIGFPALCFIYNEEPPQEYDPRGLAKVKDERCEE
AIDFFKKTGARVRGHTRVLDAIAALDIRYLLMESAPKLDPDNT
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgatcgattccgaggacatagttcaaatatggagtcccttcctcgattatctagtgaaa
ttggagttggagctcaagtgttccatctgtactaacttgcttaaggtgccgaaagtgttg
ccctgcgatcatgtgttttgcagtggttgtataagttctttgatcgacaagggttctgtt
tgtccttcctgtgacctgccttttcttcctaaagatataaggcttgctttacatgtggaa
aggcttgtgagcatttttcaagagatggatgatgctatcggcaccattgttcaaaggaaa
gcatctcctcctggttcccctggtgtaaggatatctgccaaaaaaaacccagtctcagtc
aacaatcatatcgaagctaagtcaataggagtacaacatatgcctcaagagaaatcgggc
catctccattcgcatggttctccattgactggtgagggtagtaataaaactagacatgat
ggagaaaatcaggaaataattttagttggaagcatgaattcggagcaaaagtctggtata
gttgttcctttggacaaagggtcgcctaattgcccttcaacatttagcgagaatggggat
tctaatttggacattcatgatacatattctgaacatactaccaagaagtcaccaacaaag
actatcaaagctgattcttatgcatcacatgaagttaggaggcctcaactctcaccttcc
tctgttactgggcatcctataacaaaagacgatggtaagacagctgtaggctcttctcaa
acgagagctggtgttcaaaaacaaaagacttccaagaggcagaagctaaacaataaacgt
gtcaaaaaccataccattcagcatgttcgtacacctagcattgtgtttggtgatgaatgt
gcattttgccattccttcaggaccactgaggcgtctgggccaatgtgttgctacaaagat
ggcagactcgtagctatggaggaagcaggccaatctcatgtgacacatgcacatcaaaag
tgcattgaatgggctccacagatatatttttctggtgatactgtaaagaatttggaggtg
gaacttagacgtgcctcaaagataaagtgcagcaaatgcgggctgaaaggtgctgctctt
ggttgttactttgggagctgtcctaaaagctttcatgtgccctgtgcggttgagatcttt
gattgtcgatgggattgcgtaaatttccatgtgttgtgccctaatcattcttcagaaaaa
ttgccatgtgatgatgatgggcgacttgaaaaatcttctggaactacacattttccatca
gttcagatagaatgtcgaaaatcttcggggaatctaacagaacatcaaagtagcgaacat
cacgcagctgctgttggtgttaaaaatgatagaatatttattggatctgctctcatggat
tcagaaaaggagctactggtcaagtttgctagcttggttggtggaacagtgaccgaaatg
tggagaccagatgtgacccatgtcattgcttcaaccaatgagagtagtgcatacggtaga
acgcacaatgtcctaatggctattttgacggggaaatgggttctcactacaaagtgggtt
aaggtttgcatggaggctgggcattttgtttgggaagaaccctatgaagtccgctttgat
atgcatggttttacagatgggccgcccatgagaggaaggcttggagcaatggagaaggca
caaaagttgttcgcaggtctaagttttcgtctaagtgagcacttcactctctcatgcaga
cagtccctaaaagaacttgttgtcactgctggtggagttgtattagaggatgatatctta
attccacaggacccttttgccataggatttccagctctctgttttatttacaatgaagaa
cctccacaagaatatgatccaagaggtcttgcaaaggttaaagatgagagatgtgaagag
gctattgacttttttaagaagactggtgctcgagttagaggccacaccagggttttggat
gctattgctgctttggatatccgatatttgcttatggaaagtgcacctaagttggatcct
gataacacctaa
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integrated database retrieval system
