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Pongo abelii (Sumatran orangutan): 100449580
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Entry
100449580 CDS
T01416
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X5
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
pon
Pongo abelii (Sumatran orangutan)
Pathway
pon04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
pon00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
100449580 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pon04040
]
100449580 (SCN9A)
Ion channels [BR:
pon04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100449580 (SCN9A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
100449580
NCBI-ProteinID:
XP_009236070
Ensembl:
ENSPPYG00000012899
LinkDB
All DBs
Position
11:complement(68741068..68919920)
Genome browser
AA seq
1740 aa
AA seq
DB search
MILTVFCLSVFALIGLQLFMGNLKHKCFRNSLENNETLESIMNTLESEEDFRKYFYYLEG
SKDALLCGFSTDSGQCPEGYTCMKIGRNPDYGYTSFDTFSWAFLALFRLMTQDYWENLYQ
QTLRAAGKTYMIFFVIVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKELEFQQMLD
RLKKEQEEAEAIAAAAAEYTSIRRSRIMGLSESSSETSKLSSKSAKERRNRRKKKNQKKP
SSGEEKGDAEKLSKSESEDSIRRKSFHLGVEGHRRAHEKRLSTPNQSPLSIRGSLFSARR
SSRTSLFSFKGRGRDIGSETEFADDEHSIFGENESRRGSLFVPHRPQERRSSNISQASRS
PPMLPVNGKMHSAVDCNGVVSLVDGRSALMLPNGQLLPEVIIDKATSDDSGTTNQIHKKR
HCSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHKFLIWNCSP
YWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLAIGNLVFTGIFA
AEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLLRVFKLAKS
WPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISDDCRLPRW
HMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLNLFLALLL
SSFSSDNLTAIEEDPDANNLQIAVTRIKKGINYVKQTLHEFILKAFSKKPKISREIRQAE
DLNTKKENYISNHTLAEMSKGHNFLKEKDKISGFGSSVDKHLMEDSDGQSFIHNPSLTVT
VPIAPGESDLENMNTEELSSDSDSEYSKVRLNRSSSSECSTVDNPLPGEGEEAEAEPMNS
DEPEACFTDGCVRRFSCCQVNIESGKGKIWWNIRKTCYKIVEHSWFESFIVLMILLSSGA
LAFEDIYIERKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCWLDFLIVDV
SLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIMNVLLVC
LIFWLIFSIMGVNLFAGKFYECINTTDGSRFPASQVPNRSECFALMNVSQNVRWKNLKVN
FDNVGLGYLSLLQVATFKGWTIIMYAAVDSVNVDKQPKYEYSLYMYIYFVIFIIFGSFFT
LNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGNKIQGCI
FDLVTNQAFDISIMVLICLNMVTMMVEKEGQSQHMTEVLYWINVVFIILFTGECVLKLIS
LRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRILRLVKGAK
GIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEDGINDMFNFETFGNSM
ICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISF
LVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSKLSDFAAA
LDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLRSQMEERFM
SANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLLN
KKDMAFDNVNENSSPEKTDATSSTTSPPSYDSVTKPDKEKYEQDRTEKEDKGKDSKESKK
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atgatcctgactgtgttctgtctgagtgtgtttgcactaattggactacagctgttcatg
ggaaacctgaagcataaatgttttcgaaattcacttgaaaataatgaaacattagaaagc
ataatgaatactctagagagtgaagaagattttagaaaatacttttattacttggaggga
tccaaagatgctctcctttgtggtttcagcacagattcaggtcagtgtccagaggggtac
acttgtatgaaaattggcagaaaccctgattatggctacacgagctttgacactttcagc
tgggccttcttagccttgtttaggctaatgacccaagattactgggaaaacctttaccaa
cagacgctgcgtgctgctggcaaaacctacatgatcttctttgtcatagtgattttcctg
ggctccttttatctaataaacttgatcctggctgtggttgccatggcttatgaagaacag
aaccaggcaaacattgaagaagctaaacagaaagaattagaatttcaacagatgttagac
cgacttaaaaaagagcaagaagaagctgaggcaattgcagcggcagcagctgaatataca
agtattaggagaagcagaattatgggcctctcggagagttcttctgaaacatccaaactg
agctctaaaagtgctaaagaaaggagaaacagaagaaagaaaaagaatcaaaagaagccc
tccagtggagaagaaaagggagatgctgagaaattgtccaaatcagaatcagaggacagc
atcagaagaaaaagtttccaccttggtgtagaagggcataggcgagcacacgaaaagaga
ttgtctacccccaatcagtcaccgctcagcattcgtggctccttgttttctgcaaggcga
agcagcagaacaagtctttttagtttcaaaggccgaggaagagatataggatctgagact
gaatttgctgatgatgagcacagcatttttggagaaaatgagagcagaaggggctcactg
tttgtgccccacagaccccaggagcgacgcagcagtaacatcagccaagccagtagatcc
ccaccaatgctgccggtgaacgggaaaatgcacagtgctgtggactgcaatggtgtggtc
tccctggttgatggacgctcagccctcatgctccccaatggacagcttctgccagaggtg
ataatagataaggcaacttctgatgacagcggcacgaccaatcaaatacacaagaaaagg
cattgtagttcctatctcctttcagaggatatgctgaatgatcccaacctcagacagaga
gcaatgagtagagcaagcatattaacaaacactgtggaagaacttgaagagtccagacaa
aaatgtccaccttggtggtacagatttgcacacaaattcttgatctggaattgctctcca
tattggataaaattcaaaaagtgtatctattttattgtaatggatccttttgtagatctt
gcaattaccatttgcatagttttaaacacattatttatggctatggaacaccacccaatg
actgaggaattcaaaaatgtacttgctataggaaatttggtctttactggaatctttgca
gctgaaatggtgttaaaactgattgccatggatccatatgagtatttccaagtaggctgg
aatatttttgacagccttattgtgactttaagtttagtggagctctttctagcagatgtg
gaaggattgtcagttctgcgatcattcagactgctccgagtcttcaagttggcaaaatcc
tggccaacattgaacatgctgattaagatcattggtaactcagtaggggctctaggtaac
ctcaccttggtgttggccatcatcgtcttcatttttgctgtggtcggcatgcagctcttt
ggtaagagctacaaagaatgtgtctgcaagatcagtgatgactgtaggctcccacggtgg
cacatgaatgacttcttccactccttcctgatcgtgttccgcgtgctgtgtggagagtgg
atagagaccatgtgggactgtatggaggtcgccggtcaagccatgtgccttattgtttac
atgatggtcatggtcattggaaacctggtggtcctaaacctatttctggccttattattg
agctcatttagttcagacaatcttacagcaattgaagaagaccctgatgcaaacaacctc
cagattgcagtgactagaattaaaaagggaataaattatgtgaaacaaaccttacatgaa
tttattctaaaagcattttccaaaaagccaaagatttccagggagataagacaagcagaa
gatctgaatactaagaaggaaaactatatttctaaccatacacttgctgaaatgagcaaa
ggtcacaatttcctcaaggaaaaagataaaatcagtggttttggaagcagcgtggacaaa
cacttgatggaagacagtgatggtcaatcatttattcacaatcccagcctcacagtgaca
gtgccaattgcacctggggaatccgatttggaaaatatgaatactgaggaacttagcagt
gattcagatagtgaatacagcaaagtgagattaaaccggtcaagctcctcagagtgcagc
acagttgataaccctttgcctggagaaggagaagaagcagaggctgaacctatgaattcc
gacgagccagaagcctgtttcacagatggttgtgtacggaggttctcatgctgccaagtt
aacatagagtcagggaaaggaaaaatctggtggaacatcaggaaaacctgctacaagatt
gttgaacacagttggtttgaaagcttcattgtcctcatgatcctgctcagcagtggtgcc
ctggcttttgaagatatttatattgaaaggaaaaagaccattaagattatcctggagtat
gcagacaagatcttcacttacatcttcattctggaaatgcttctaaaatggatagcatat
ggttataaaacatatttcaccaatgcctggtgttggctggatttcctaattgttgatgtt
tctttggttactttagtggcaaacactcttggctactcagatcttggccccattaaatcc
cttcggacactgagagctttaagacctctaagagccttatctagatttgaaggaatgagg
gtggttgtgaatgcactcataggagcaattccttccatcatgaatgtgctacttgtgtgt
cttatattctggctgatattcagcatcatgggagtaaatttgtttgctggcaagttctat
gagtgtattaacaccacagatgggtcacggtttcctgcaagtcaagttccaaatcgttcc
gaatgttttgcccttatgaatgttagtcaaaatgtgcgatggaaaaacctgaaagtgaac
tttgataatgtcggacttggttacctatctctgcttcaagttgcaacttttaagggatgg
acgattattatgtatgcagcagtggattctgttaatgtagacaagcagcccaaatatgaa
tatagcctctacatgtatatttattttgtcatctttatcatctttgggtcattcttcact
ttgaacttgttcattggtgtcatcatagataatttcaaccaacagaaaaaaaagcttgga
ggtcaagacatctttatgacagaagaacagaagaaatactataatgcaatgaaaaagctg
gggtccaagaagccacaaaagccaattcctcgaccagggaacaaaatccaaggatgtata
tttgacctagtgacaaatcaagcatttgatattagtatcatggttcttatctgtctcaac
atggtaaccatgatggtagaaaaggagggtcaaagtcaacatatgactgaagttttatat
tggataaatgtagtttttataatccttttcactggagaatgtgtgctaaaactgatctcc
ctcagacactactacttcactgtaggatggaatatttttgattttgtggttgtgattatc
tccattgtaggtatgtttctagctgatttgattgaaacgtattttgtgtcccctaccctg
ttccgagtgatccgtcttgccaggattggccgaatcctacgtctagtcaaaggagcaaag
gggatccgcacgctgctctttgctttgatgatgtcccttcctgcgttatttaacatcggc
ctcctgctcttcctggtcatgttcatctacgccatctttggaatgtccaactttgcctat
gttaaaaaggaagatggaattaatgacatgttcaattttgagacctttggcaacagtatg
atttgcctgttccaaattacaacctctgctggctgggatggattgctagcacctattctt
aacagtaagccacccgactgtgacccaaaaaaagttcatcctggaagttcagttgaagga
gactgtggtaacccatctgttggaatattctactttgttagttatatcatcatatccttc
ctggttgtggtgaacatgtacattgcagtcatactggagaattttagtgttgccactgaa
gaaagtactgaacctctgagtgaggatgactttgagatgttctatgaagtttgggagaag
tttgatccagatgcaactcagtttatagaatatagcaagctctctgattttgcagctgcc
ctggatcctcctcttctcatagcaaaacccaacaaagtccagctcattgccatggatctg
cccatggtcagtggtgacaggatccattgtcttgacatcttatttgcttttacaaagcgt
gttttgggtgagagtggggagatggattctcttcgttcacagatggaagaaaggttcatg
tctgcaaatccttccaaagtgtcctatgaacccatcacaaccacactaaaacggaaacaa
gaggacgtgtctgctactgtcattcagcgtgcttatagacgttaccgcttaaggcaaaat
gtcaaaaatatatcaagtatatacataaaagatggagacagagatgatgatttactcaat
aaaaaagatatggcttttgataatgttaatgagaactcaagtccagaaaaaacagatgcc
acttcatccaccacctctccaccttcatatgatagtgtaacaaagccagacaaagagaaa
tatgaacaagacagaacagaaaaggaagacaaagggaaagacagcaaggaaagcaaaaaa
tag
DBGET
integrated database retrieval system