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KEGG   Salmo salar (Atlantic salmon): 106565702
Entry
106565702         CDS       T04363                                 
Name
(RefSeq) nuclear pore complex protein Nup214-like
  KO
K14317  nuclear pore complex protein Nup214
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106565702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sasa03019]
    106565702
Messenger RNA biogenesis [BR:sasa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     106565702
SSDB
Motif
Pfam: Nup214_FG WD40 NUP214 ANAPC4_WD40
Other DBs
NCBI-GeneID: 106565702
NCBI-ProteinID: XP_013988560
UniProt: A0A1S3LCJ1
LinkDB
Position
ssa01:complement(125352015..125428624)
AA seq 2029 aa
MSEDPDSPPEREMKDFQFRQMKKTRVFDSPDELPKDRSSLLAISNKFGLTFVGLDRKIKV
YLTGDILASDKVDGNSNEIVEGIAALADVHVELPVHNLGLSSDELTLSASGMSEASGLSL
AFYDVRTFINKARPQKLPFATLQPRAGLGIIVQDLKWNPVQVSMLATCLSDGSMMVLEVT
DSVTVQAQLPATEGITCVCWSPKGKQVAAGKMNATVSQYTPGLQEKKVIPCPSFYSSDNP
VKVLDVQWLSTFVFAVAYAAADGCPETPPELVVISLPTKTEKREERYLNFNDPVYGTCTE
RQHHYFLSHIEDWDVVLAASAASIEVSVIAKQEDKTNWELWLLEDASRGELPVSQNNDDT
LPLGLAIDYTSQQEIHITDEKTLPPAPTLLLLSTDGVLCPFSLLNFNPGVKQLVAAPTSL
ALDGERLPPAGSAAPLPPYPTSSLPSAPAAFPPLRLPLATTPNPPPPASSPASVSLFTAA
PAPASSSGFSFSMPPSSSTAPPAFFLGGSTAFSASPALATSGSFSFSSKPLTETPAAASA
FSVSAPKLPVMEMAPVPAPTPKPTPQRLATASPITVLRGTPEPTTPAVKMNLNDRFLAVE
TPAAAPASQPFSFNSTPKAAFSEPSSHPAPLPIVTKSAAMPGPVQTSTPPTVVQKSAPAT
QTSTPTPQAALSVNALEKQLQPRKDSDPVMAGILEEIAHFQKELDDLKARSHKADFRVGT
TEEMKELRKESEDLHIFTLEIKDTTESLHGDISTLKTTMLEGFAGAEDAKAQSELNRHRG
YLQLLYKKPLDPRSEDQLKEIRRLYQYVKFAVEDVNDVLDLEWEKHLENKKKQKHMIVPE
REALFTALANNLDIINQQKQRLDTLVKDLHALRLYNKTAAWSTPAPSQPAATTPTEQSLD
NELESLRDALLKASLETIPKTTSKSPAKMSPMKQSQLRNFLSKRQTPPVRSTAPANLSRS
AFLSPKYYADLDDVSSTSSLSQALDPDYSHYFAEEEPEPEPAPLPMLPLSMPRHPTVVRT
PSIAPGFGAIQSTPFSKVRQGLGLSPIMSPVPTNKINMGGADSTALATKTVKHGAPPTEK
ATPVPLPAQQAAAKAAFLRQMANQKPAVSGSLTESTLKTVPQVVNVQELNDKGPPPPIST
VISSSVPAPVGQVVQQVLATVANTNQAKRNSTQGILKVSAESVCSASPQGFVFGGPPKAD
APVSLPPSSSAPSLGEQSSKAFSFTAASAGGFSFSSVSQGAPPVKDVSKFSFSSAGGGTG
KMMFGSSAGEEPFSFTPKSTSPALGANGSPTPLSSMSGEPVRPTSITPTLRVEPQAPKVV
GGETLGSFSGLRVGQGDEEKPSAATFSFGQPDNGGALGLGTGAAQFSFGSALQQGKLAEA
AFGEADSTLTDLSKAAFKPPEPAALSVTKPVFSTSAATSFSSLLAAPLSSPSTTLEKEHP
KTPTPPADPTPPLEPASSQPSPSVSPPIAEPEVTTSPESSVTPTPTIPEKAPTPPAPPTA
STTSFPPASITPPAQAAPNTSPEPVNESTPAPEASPPAITPTPVAPPLAYPAPSSDKPVS
IFTQPPAVIAVSTTIAVTSLTPVINTAAPASTTPTNSNSVFGQPAPASAAAGGFGSTGFG
APPATGAAAGFGKPVFGQTVGGFGQPAANVAGGFGFGQSAFGANPGFGQPAAASPAAVAS
TAASGGGLFGALSVSNASGFSFGTPSASTASSTGTGLFGQPSATPAFGQQSAGFGQGSVF
GSNTTTTSSTGFSFGQAAAFGSSSTTSVFGQQPSGGSVFGQQPSSGGGLFGSSSATVAGS
QQAGGGFFSGLGGKPSEDAANKNPFGTTAASGGFSQPNQTGGPTLFGNSGAKTFGFGSPA
STFGGGEQTASGTFSTGGGSVAAQGFGSFSTPAKQTGGFGSAPVFGSPPAFGGSPAFGGA
AAFGSAPSFSSPMGSSASKVFGEGTAAANVGGFGFASTQQSTPSFGALANQSAPSFGNLA
QQQQGSGFGAPQPSGFSAFGQQGGGFGSAGGFGSNQSSQMFGASSGWRS
NT seq 6090 nt   +upstreamnt  +downstreamnt
atgagtgaagaccctgactctcctcccgaaagggaaatgaaggattttcagttccggcaa
atgaagaaaacccgtgtctttgattcacctgatgagctgccgaaggatagatcaagtctg
ctcgccatctccaacaaatttggactgacatttgtcggactagacagaaagatcaaggtg
tacctcacgggggacatcctagcttcagacaaagttgatggaaactccaatgaaatagtt
gaggggatagcagccttagctgatgttcatgtggagttgcctgtgcacaacctgggactc
agcagtgatgagctcaccctgtcagccagtggcatgtcagaagcatcaggcctgtcactg
gccttctacgacgtccgcaccttcatcaacaaggcccgaccgcagaagttgccatttgcg
actctgcaaccgagagccggcctgggcattattgtgcaggacctcaaatggaacccggtg
caggtttccatgctggccacctgtctgtctgacggcagcatgatggtgctggaggtcaca
gacagcgtcacagtgcaggcccagctacctgccacagagggcatcacctgtgtatgctgg
agtcccaaaggaaagcaagtagccgcaggaaaaatgaatgcaacagtcagtcagtatact
ccagggcttcaggagaagaaagtgatcccctgcccaagcttctacagctctgacaaccct
gtcaaagtgctggatgtgcagtggctgagtacgtttgtgtttgctgtggcatatgcagca
gccgacggctgtccggaaacacctcctgaactggtggtgatctccctccctacaaagaca
gagaagagggaggagaggtacctgaacttcaacgacccagtgtacggcacctgcactgag
agacagcatcactacttcctcagccacatagaggactgggatgttgttcttgccgcatca
gcagcctccattgaagtcagtgtcatcgccaagcaagaagataagaccaactgggagctg
tggttgctggaggacgccagcaggggagagctgcctgtctctcagaataacgacgacacg
ctgcctctggggctggccatcgactacaccagccagcaggagatccacatcaccgatgag
aagactttgcccccggcgcccactctgctgctgctgtctacagatggagttctgtgcccc
ttttcactgctcaacttcaaccctggggtcaagcaactggtcgctgcccccaccagcctg
gccctggacggagagagactgccccctgcaggatctgcagctcccctccccccttaccca
acctcctctctcccatcagccccggcggcattccctccgctccgccttcccttggccacc
acaccaaaccctcctccccctgcctcctcccctgcctctgtttcactgttcaccgcagcc
ccagctccagcctcctcatccggcttctcgttctccatgcccccctcctcttccactgct
ccccccgccttctttctggggggctctactgccttcagtgcgagcccagccttggccacc
tctggtagcttctccttctcctccaagcccctgacagagaccccagccgcagcttcggcc
ttctccgtcagtgcccccaaacttccagtgatggaaatggctccagttccggcccccact
ccaaagcccaccccccagcgcctggccaccgcctcccccatcacggtgctccgaggcacc
cccgagccaaccactcccgctgtgaagatgaacctcaatgacagattcctggcagtagaa
acccccgctgcagctccagcctcccagcccttctccttcaactccacacccaaagctgcc
ttctctgagcctagcagccatcccgctcctctgcccatagtcaccaagtctgcagccatg
ccaggcccagtccaaaccagtacaccccccacggttgtacagaaatctgccccagccacc
cagacaagtacacccactccacaggctgcgctgagtgtgaatgccctggaaaagcagctg
cagccgaggaaggactcagacccagtcatggctggaatactggaggagatcgcccacttc
cagaaggagttagatgacctgaaggcacgcagccacaaggcagacttcagagtgggcacc
acagaggagatgaaggagctgaggaaggagtctgaggacctccacatcttcaccctggag
atcaaagacaccactgagtctctccacggggacatcagcactctgaagaccaccatgctg
gagggctttgccggggcggaggacgcaaaggcccagagtgagctcaacagacaccggggc
tacctgcagctgctgtacaagaaaccactggacccacgcagtgaagaccaactcaaggag
attcgcaggctgtaccagtatgtaaagtttgctgtggaggatgtgaacgacgtgttggac
ctggagtgggagaaacatctggagaataagaagaaacagaaacacatgattgtcccagag
agggaggctctattcacagccttggccaacaacctggacatcatcaaccagcagaagcag
aggctggacacactggtcaaagacctccatgccctgcggctctacaacaagactgcagcc
tggagcactcctgcccccagccagcctgctgctaccacccccaccgaacagagtttggac
aacgagctggagagtttgagggatgcactcctgaaagccagtctggagaccattcccaag
accacttcgaaatctccagccaaaatgtctccgatgaagcagtctcagctgcgtaacttt
ctctccaagaggcagacaccaccagtccgctccaccgctccagccaacctgtcccgctcg
gccttcctctctcccaaatactacgcggacctggacgatgtgagctccacctcctccctg
tctcaggccctggacccagactactcccattattttgcggaggaagaaccagagcctgag
cctgcccccctccccatgctccccctctctatgccccgccaccccacggtggtacgcacc
ccctccatagccccggggtttggggccatccagtccactcccttcagtaaggtgcgccaa
ggactgggcctcagccccatcatgagcccagttccaaccaataagatcaacatgggaggt
gccgacagcacggcactagccactaagacggtgaagcacggagccccgcctactgagaag
gccacacccgtcccccttcctgcccaacaggctgctgctaaagccgctttcctcagacaa
atggccaatcagaaaccagcagtcagtggctctctgacagagtccaccctgaagactgtt
ccccaggtggtcaacgtacaggagctcaatgacaaaggaccgccaccgcctatctccact
gtgatcagctcctcagtcccagccccggtcggtcaggttgttcagcaagttttggctaca
gtggccaacaccaaccaggccaaacgaaattctactcaaggcatactgaaggtgtccgct
gagagtgtctgctcagcttccccccagggttttgtgtttggcggaccccctaaagctgac
gccccagtctccctgcccccctccagctcagccccatcactgggggagcagagcagcaaa
gccttctccttcaccgcagcgtctgccgggggcttcagtttctcctctgtgtcccaagga
gctccaccagtaaaggacgtgagtaaattctccttcagcagcgctggcggcggcacagga
aagatgatgttcggctcctctgccggggaggaacccttctccttcacccccaaatccacc
tcccccgccctgggggccaacggctcccccacccctctttccagcatgtcaggcgagcct
gtgaggcccacctccatcacccccaccctcagagtggagccccaggcccccaaggtggta
ggaggagagaccctggggagtttctcaggtctacgtgtgggccaaggggacgaagagaag
ccctcagcggccacgtttagctttgggcagccggacaacggaggggcgctagggttaggc
acgggggcagcccagtttagttttgggtcggccctccagcaagggaagctagccgaggct
gcatttggtgaggcggattctaccttgacagacttatccaaggctgcatttaagcctccc
gaaccagccgccctgtctgtcactaagcctgtgttctccacgtcagcagccacctccttc
agcagcctcctagcggcacccctctcttccccctcaaccaccctggagaaggagcacccc
aaaacccccacccccccggcagaccccactccacccctagagcctgcttcctcacagccc
agcccctccgtcagcccccctatcgctgagcctgaggttactacctcgccagagtcctca
gtcacccccacccctaccatccctgaaaaagccccaacgcccccagctccccccaccgcc
tcgaccacctctttcccccctgcctccatcaccccaccagcccaggcagccccaaacacc
agcccagagcctgtcaatgagtccacgcctgcccctgaggcctcaccacccgcaatcacc
cccaccccggtggccccaccactagcctacccggcccccagctcggacaaacctgtctcc
atcttcacccagccaccggccgtcatcgcagttagcacaactatagccgtcaccagtctc
accccggtcatcaacactgcagcccccgcctccaccacccctaccaactccaactccgta
tttgggcagcccgctccagcctcagcggctgccggcggctttggttccaccggcttcggt
gctccccctgctacaggcgcagcagctggcttcgggaagcccgtattcggacagacagta
ggcgggtttggccagcctgctgctaatgtagccggtggttttggttttggccagtctgca
tttggggccaaccccggatttggacagcccgcagcggcctcccctgctgcagttgccagt
accgctgctagtggaggtggtttgtttggagccctcagtgtcagcaatgcaagcggcttt
tcctttggcacccccagcgccagtacggccagcagtacaggcacaggcctgttcgggcag
ccgagcgccaccccggccttcgggcagcagagtgccgggtttggacaaggctctgtgttt
ggaagcaacaccaccactacatcctccactggtttcagctttggacaggctgcagctttc
ggaagctcctccactacctcagtgtttggtcaacagcccagtggtgggagtgtctttgga
cagcaaccatccagtggtgggggtctgtttggttctagctctgccacggtagcaggctcc
cagcaggcagggggaggcttcttcagtggcctgggggggaaacccagtgaggacgccgcc
aacaagaaccccttcggcacgaccgccgcctccgggggcttcagtcagcccaaccagaca
ggaggacccaccctgtttgggaacagcggggccaaaacctttggctttggctctccagca
tcaacattcggagggggggagcagacggccagtgggacctttagcacgggaggcgggagc
gtggctgctcaggggttcggctccttctccacccctgccaaacagacaggtggttttggg
agcgcccctgtgttcggtagcccccctgcttttgggggctccccggcttttgggggggca
gcagcgtttggctcggcaccctcttttagcagtcccatgggctcctcagccagcaaagtg
tttggagagggaacggcagccgccaacgtgggaggattcggctttgcctccactcaacaa
agtacaccgtcgtttggtgcactggccaaccagagtgccccatcgtttggtaacctggcc
cagcagcagcaggggtcagggttcggagctcctcagcccagcggcttctctgcgttcgga
cagcagggaggaggctttgggtctgctggtggctttgggtccaatcaatcttctcaaatg
tttggagccagttcgggttggagaagctag

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