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Sinocyclocheilus grahami (golden-line barbel): 107591095
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Entry
107591095 CDS
T04918
Name
(RefSeq) agrin-like isoform X1
KO
K06254
agrin
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04512
ECM-receptor interaction
sgh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107591095
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107591095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sgh00535
]
107591095
Proteoglycans [BR:
sgh00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107591095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
SEA
CFAI_KAZAL
EGF
Laminin_G_3
hEGF
GAPES2
Motif
Other DBs
NCBI-GeneID:
107591095
NCBI-ProteinID:
XP_016135597
LinkDB
All DBs
Position
Unknown
AA seq
2041 aa
AA seq
DB search
MGFSCRKAFYWPVWSFAVVFVILSQRCHGSCSEKELETREEEANVVLTGTVEEILNMDPV
HNTYSCKVRVWRYLKGKTMVNGEVLLDGGNKVMIGGFGDPHICDNQVATGDTRIFFVNLA
PEFMWPNHKNELMLNSSLMRITLRNLEEVEHCVEDKPVHFTPAPPPDGCRGKLCGFGAVC
ERNPTDPSKGECVCKKIVCTSVVAPVCGSDSSTYSNECELEKAQCNTQRRIKVMRKGPCA
LKDPCSEVTCSFGSTCIQSSDGLSAKCMCPLSCENVPKHVVCGSDGLDYQSECELHMKAC
ATQKNIRVHHQGRCDPCSDTLNSLSVACRVNPKTYKQFTFAPADSCPPDSTPICASDGHT
YYSECQMERTALQNNLELKKVSSGSCKEKRGCPNGCKFNAMCLLENGEFQCSCDPIQCDG
TYKPLCGKDGKTYPNDCERKLEECRIETDIPIKQQGPCDLNLESPCLKKTCEFGAVCVVK
NSKPVCECSDACPQDQDPVCGSDGHTYSSSCQMKAMGCALQKKIQMQHKGPCADESCNNC
SFGAICDAQTGRCVCPKGCLETRQPVCGSDGMTYENECKLNVEACTKQLDLRVVAHGECK
TCGSTVCSWGARCVENQCECQQCTGQPVKPVCGNDGNTYNNDCELRLASCKKQRKIEVAK
PGVCDEDCGSGGSGSGSETCEQDRCRRYGGSWDDDTEDDRCVCDFTCQTVPHSSVCGSDG
NTYTSECELKKARCEKQMDLLLQSQGPCSAIISAPTELVASQHCSKTVYGCCQDNKTAAL
GFGLAGCPSVCQCNHYGSYGGTCDPSTGQCSCKPGVGGLKCDRCEPGFWNFRGIVTENMS
GCTPCNCDGVGSVRDDCEQMSGLCSCKPGVKGMKCNVCPDGSKMGANGCDKGPEAPKSCD
ELMCHFGASCVEVNGQAHCECPSPDCDEKNKTKVCGSDGVTYADRCQLRTIACRQDKEIT
VEHLGQCKESIELTAKPTPFPTTHHTTPPTAHVKITKQRHGHTTTTTSSILKDLDSFVVE
ALPPPKMVEAGKYSSSFTTHRPTTLNKPPRTSSPPLDSSPDFDESGSGEPSGDDEMVSGM
EESGEEPLGTTVATTTLPTAEERSSCDNTPFGCCPDGKTAAISSENTNCPSTMRFSGFLH
LDKVEGQEVFYTPEMEDPKSELFGETARSIESALNELFRKSDVQKDFQSVRVKNLAPSNS
IIAFIEVHFDPDTRFSVEAIEGALLKQLKVSKDTGIVVKKPEEENIRITTYGLSAVPFFT
TTTTTVASVTTPTTTSLSPTSAFTTLRPTTTRWPFTSRRTTTDAPATTTPSKAPTTTVSL
KNRLAVHGNRPCESQPCRQGGTCVQEDNDFTCICPAGRGGAVCEKVIKYFIPSFGGKSYL
AFRTMRAYHTVRIAMEFRASEMTGIFLYNGQKGKKDFLSLALVEGHVELRFNTGSGTSSV
ISKVLVRPGRWHQLIVVRNRRNAMLSVDNEPSVEGQSPPGTDGLNLDTDLFIGGVLEDMI
QDVKERTSVSTGLVGCIRMLDVNNLFYNLQENGDSILYGSGVGECGNNPCMPNPCKNGAS
CQVKEAEMFHCKCVNGFSGPTCADAHNPCDPNKCHPSSRCQVLPEGGYKCECPMGREGKH
CEKVSDKGGAFIPYFTGDSFLELKGLHLYSQDLRQKFSMTVVLLANDSKGMIFYNGQKTD
GKGDFISLSLNDGILEFRYDLGKGPAVIRSKEKIKLNEWSTVNLERASRKGEISINGKDP
VRGEAPKSRKNQHTDLNLKESLFVGGAPDFRKVARAAAIKDGFKGAIQKITLMGIPILKS
DNALHSSDVSMYPYHPCSKDVCKNGGRCNPLLDSYECICRHGFTGQHCQDAIIEKSAGDT
EAIAFDGHTFIEYHNGVTKSEKALLVNKFELSIRTEATHGLILWSGKGVERSDYIALAIV
DGRVQMTYDLGSKPVVLRSSVRINTNRWIRIKASRALRDGSLQVGNEAAVTGSSPLAATQ
LDTDGALWLGGLEELSVARRLPKAYSTGFVGCVKDVIVDGVELHLVEDALNSPKIVHCSA
K
NT seq
6126 nt
NT seq
+upstream
nt +downstream
nt
atgggcttttcttgcagaaaagcgttttattggcccgtttggtcgtttgctgttgttttt
gtgattttgagtcagcgttgtcatggaagttgttcagaaaaggagctggaaacgcgagaa
gaagaggcgaatgtagttttaactgggactgtagaggagatcttgaacatggatccggtg
cacaacacttattcctgcaaggtcagggtatggcgttacctaaaaggcaagaccatggtg
aatggagaggtgctgctggacggaggaaacaaggtgatgatcggcggtttcggagacccc
catatttgcgacaatcaggtggccaccggagatacgcgcattttctttgtcaacctggcc
cctgagttcatgtggccgaaccacaagaacgaactgatgctcaactcgagcctgatgagg
attactctccgcaacttggaggaggtggagcactgcgttgaagataaacctgttcacttc
acaccggctcctcctcctgatggttgcagaggaaagctgtgtggatttggagcggtgtgt
gagagaaacccgacggacccctctaaaggagagtgtgtttgtaagaagattgtatgcacg
tctgtggtggcgccggtgtgcggatctgactcctctacctattccaatgagtgtgagctg
gagaaggcccagtgcaatacacagaggcgcattaaggtgatgcgcaaaggcccctgtgcc
ctgaaggacccatgcagtgaggtgacctgtagctttggcagcacctgcatccagtcatcc
gacggtctgtccgccaagtgcatgtgtcctctgagttgtgagaacgtccccaagcacgtg
gtgtgcggcagcgacggcctggactaccaaagcgaatgtgagctccacatgaaagcctgc
gccactcagaagaacatccgcgtgcatcaccaaggccgctgcgatccttgcagtgacact
ctgaacagcttgagtgtggcctgtcgggtgaacccaaagacctacaagcagtttaccttc
gccccagccgattcctgcccgcccgacagtacacccatctgcgccagcgacggccacact
tactatagcgagtgtcagatggagcggacggccctgcagaacaacctggagctcaagaag
gtctcttcaggcagctgcaaggagaaaaggggctgcccgaatggttgtaagttcaacgcc
atgtgtttgctggaaaacggagagtttcagtgttcctgcgaccccatacaatgtgacggc
acgtacaagcccctgtgcggaaaggacggaaagacataccccaacgactgcgagaggaaa
ctcgaagagtgccggatcgaaacagacatccccatcaagcaacaagggccctgtgatctt
aacctggagagcccctgcctgaagaagacctgcgagttcggagctgtgtgcgtggttaag
aacagcaagcctgtgtgcgaatgctcagacgcttgtccacaggaccaagaccctgtttgt
ggcagcgacgggcacacttacagcagctcatgccaaatgaaggccatgggatgtgccctt
cagaaaaagatacagatgcagcacaaaggaccatgtgcagatgagtcctgcaacaactgc
tcgtttggcgcgatctgcgacgctcagactggccggtgcgtgtgccccaaagggtgtttg
gaaacacggcagcccgtgtgcggcagcgacgggatgacgtacgagaatgagtgcaagcta
aacgtggaagcctgcactaagcagctggatctcagagtggtggcccatggagaatgcaaa
acctgtggcagcactgtgtgtagctggggagcacggtgcgtcgagaaccagtgtgagtgt
cagcagtgcacgggtcagccggtgaaacccgtgtgcggcaacgacggcaacacctacaac
aacgactgtgagctgcggctggcctcctgcaagaaacagaggaagattgaggtggccaaa
cctggcgtctgtgatgaagactgcggttcaggaggctcaggttcaggatctgaaacctgc
gagcaggatcgttgtcgacgatacggcggatcatgggatgacgacacagaggatgaccgc
tgcgtgtgtgacttcacctgtcagacagtgccgcacagctcagtgtgcggctctgatggg
aacacatacaccagtgagtgtgagctgaagaaggccaggtgtgagaagcaaatggacttg
ctgctccagagccaaggtccctgctcagctatcatatcagctcctacagagctcgtcgcc
tcccagcactgtagcaaaactgtttacggatgttgccaagacaataagaccgctgccctg
ggttttggactggctgggtgtcctagtgtgtgtcagtgtaatcattacggctcatacgga
ggcacctgcgacccgtccaccggccagtgctcctgtaaacccggcgtcgggggactcaag
tgtgaccgctgtgagcccggattctggaacttccgaggcatcgttacagagaacatgagt
ggctgcacaccgtgtaactgtgatggagtgggttcggttcgtgacgactgtgagcagatg
tcagggctgtgctcatgtaagcctggagttaagggcatgaaatgcaacgtgtgccccgac
ggcagcaagatgggagccaacggctgtgacaaaggacctgaggcacccaagtcctgtgat
gagcttatgtgccactttggggcatcatgtgtggaggtgaacggacaggctcactgtgag
tgcccgtcgccagattgtgatgagaaaaacaagaccaaggtatgtggttctgatggggtc
acctatgcagaccgatgccagctgaggaccatcgcatgcagacaagataaagagatcact
gtggagcatttaggccagtgcaaagaatccattgagctgacagccaaacctacccccttc
ccaaccacccaccacaccacccctcccaccgctcacgtcaagatcaccaaacagcgccat
ggccacaccaccaccactacttcaagcattctcaaggatctggacagcttcgtggtggag
gcactgcctccaccgaagatggtcgaggcaggaaagtactccagctctttcaccacccac
cgccccaccacactcaacaaaccaccccgcacctcatccccacctctggactccagccct
gactttgacgaatcgggcagtggagagcccagtggggacgacgagatggtgagcggaatg
gaggagagcggagaagagccacttggtacaacagtagcaactaccactcttcccacagcc
gaagaacggtcttcctgtgacaacacacctttcggctgctgtcccgatgggaagacggcc
gccatcagctctgagaatacaaactgcccctccaccatgcgtttcagtggcttcctgcac
ctggataaggtagagggtcaggaggtcttctacacgcctgagatggaggaccccaagtca
gagctgttcggcgaaacggctcggagcatcgaaagtgctctgaatgagttgttccgcaag
tcagatgtccagaaagacttccagagtgtccgtgtgaagaatctggcccccagcaactcc
ataattgcctttatcgaggttcactttgacccagacacaaggttcagtgtggaggctatt
gagggagcccttctcaaacagctcaaggtgtctaaagacactggtatcgttgtgaagaaa
cctgaggaagagaacatccgcatcaccacctatggtctttcagctgttcctttcttcacc
accaccaccaccaccgtagcgtcagtcacaactcccaccaccacttcgctgtctcccact
tctgcatttaccacgctccgcccaaccactaccagatggcccttcaccagccgcaggacc
accacagacgcaccagccaccaccactccatccaaggcccccacaaccacagtctcgctg
aagaacagactggcggttcacggcaacaggccatgcgaatcccagccctgccgccaaggt
ggaacctgcgtgcaggaggacaatgacttcacctgtatctgtcctgcaggaagaggagga
gctgtgtgcgagaaagttataaagtacttcataccatcctttggtggcaagtcttacctg
gctttccgaaccatgagggcctaccacactgtgcgaattgccatggagttcagagcttcg
gaaatgacagggatatttctgtataatggccaaaagggcaaaaaggatttcttgtctctg
gcactggttgagggacatgtggagctcaggtttaacactggttctgggacgtcttcagtg
atcagtaaggtcctggtaagaccgggtcgctggcatcagctcatagtagtgcgtaacagg
cgtaatgccatgctgagcgtggacaatgagccgagcgttgaaggacaaagtcccccagga
acagatggactcaacctggacacagaccttttcatcggtggagtgcttgaagacatgata
caagatgtaaaggagaggacgtcagtttccacaggcctggtgggctgtatccgcatgctg
gacgtcaacaacttgttctataacctgcaagagaatggcgacagcattttgtacggctca
ggcgtgggtgagtgcggcaacaatccatgcatgccgaacccctgcaagaacggagcctcc
tgccaggtcaaagaagccgagatgttccactgcaaatgtgtcaatggtttctctggtcca
acctgcgctgatgcccacaacccttgcgaccccaataaatgccacccatcatcgcggtgc
caggtccttccggagggaggttacaaatgcgaatgtccaatgggacgtgaaggcaagcac
tgtgaaaaagtgtcagacaagggaggtgctttcattccttactttactggagattctttc
ctggagctcaagggccttcatctctacagccaggatctgaggcaaaagttcagcatgact
gtggttctgttggccaatgattccaaaggcatgatcttctacaacggtcagaagactgac
ggcaaaggagatttcatctctctctccctgaatgatggtatcttggagtttagatatgac
ctgggcaaaggaccagctgtcattaggagtaaagaaaaaatcaagctgaacgaatggagc
acagtgaatctggagagggccagcagaaaaggagagatcagcattaacggcaaagacccc
gtccgaggagaagcgccgaaatcacgcaagaatcagcacacagatcttaatctgaaggag
tcgctctttgtgggcggagcccctgatttccgcaaagtagccagagctgctgcgatcaaa
gatggcttcaaaggggccattcagaagattactctgatgggaattccaatcctgaaatct
gataacgcccttcactccagtgatgtgtccatgtatccctaccacccctgctccaaagat
gtttgtaagaacggaggccgctgcaaccctctgttggacagctacgagtgcatctgccgc
cacggattcactggacagcactgccaggacgcaataatcgagaaatctgctggggacacc
gaggccattgcattcgatggtcatacattcattgaatatcacaacggagtcaccaagagc
gagaaggccctgctggtgaataaatttgaactgagcatcaggactgaggctactcacggt
ctgattttgtggagcggcaagggagtggagcgatccgattacatcgccctcgcaattgtg
gacggccgtgtgcagatgacctatgacctcggctccaagcctgtggtgctgcgctcctct
gtacggatcaacaccaaccgctggatacgaatcaaggccagcagagcgctcagagacggc
tcgctgcaggttggtaatgaggcagctgtcactgggtcatcacccttggctgccacacag
ctggacacagacggcgctctctggttgggtggtctggaggagctgtctgtagctcgccgg
ttgcccaaggcttacagcacaggctttgtcggctgcgtgaaagacgtgatagtcgacggg
gtggaactacatctggttgaggacgccttaaacagtcccaaaattgtacactgttctgcc
aaatag
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integrated database retrieval system
