Svoboda
|
Graniru
|
BBC Russia
|
Golosameriki
|
Facebook
Xiphophorus hellerii (green swordtail): 116719885
Help
Entry
116719885 CDS
T07363
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1-like isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
xhe
Xiphophorus hellerii (green swordtail)
Brite
KEGG Orthology (KO) [BR:
xhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xhe04131
]
116719885
Membrane trafficking [BR:
xhe04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
116719885
Small GTPases and associated proteins
Rab associated proteins
116719885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
116719885
NCBI-ProteinID:
XP_032418553
LinkDB
All DBs
Position
5:complement(16883520..16953873)
Genome browser
AA seq
1570 aa
AA seq
DB search
MSASVGPHGGPRPPTVPPSMPDLPDLSHLTEEERKIIMDVMARQKKEEEKEQEMLKTLHQ
QFESYKQEVRRIGVETRRQQTQQKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGGR
VSLRSNNVMWVCNLCRKQQEILTKSGEWFSGSGARPGSLGTSLKDPATGGEGQRDRKLLR
SRSQAPPFSTNAGPLDGTQLPAGVLPAKSGDTMPSSRSQSEPPKEKKRPVSLHEQNGRGG
MGRGSGRRPPGKLQSQSSLDERVSTGDRERRFGEGRRLEKINSQDYEDGEDNLRHTGMHR
RHPEDEEQRERQRREEEFQNRYRSDPNLARYPVKPQKEEQEMRMHAKVSKVRHERRHSDL
AINEVGLGPGEGGGGGGHVPPNRLARRGGGGGEGERKGLIENHRAFPVDRTAGMGGGPPP
TGGGGKSGPQTGGLVPNNQGSNNSRPETGTTRDKGGDPLLRKDSQSSDQSDSLRPPPPRS
YKGKRGINKRQMSISSSEEEGGSTPEYTSCDDVDMESVSEKGDLDCHPLDPTVWHHPVTW
QPSKEGDHLIGRITLSKRSAMPREAGSLLGLKVVGGKITQSGRLGAFITKVKKGSLADVV
GHLRAGDEVLQWNGKSLPGATKKEVYNIILESKAEPQVEIVVSRPIGDIPRIPGSPHPPL
ESTGSSSFESQKMDRPSISVMSPTSPGTLRDLPLVLPGQLSVKLWYDKVGHQLIVNVLQA
IDLPPRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKSSEPKWNQTFIYSHVHRRDFRER
MLEITVWDQPRVQEEESEFLGEILIELETALLDDTPHWYKLQTHDVSSIPLPQPSPYLPR
RHVHGDSPSKKLQRSHRIIDTEFDDGLIGGTKGGERNSRERDRSSTLAVPDQQRPIQHRS
RSVSPHREDSCRARSRPPHVPMQRSLDEIHQNRNHSHSPTHYHESSLEHQRSGDSDYEYS
EDSEVLEMNRSIRGGSAECLHTNSSTLPACLKSKPYTRQEGGGILPRSILTHRVLRFTDE
VTVSDLQPSLDRVRSASTTCLRPDTNFHSSDRDRCSNSLPRRTPPSPRILVEHVAPEEER
ESINSSSLNCLWESRKCLELDSRIQPTSILRGSRRRGGPLRPFVQTVLSGSCPNSPRPDR
AHPHGSPSPPTVLSGRRGRQLPQLPAKSSSIEHALAVEERARQLPMKVHSYRPSASHNSQ
TDLKTKREMYAEQRRSSDNMSARSSDSDMSDVSALSRASSASRLSSTSYMSIQSERPGGR
LSRQMRSSMGRNMMKSSSVSGEIYTQERTDGSQSDTALGTVSGGSKKRRSSISARFVAIV
GKNRSRSTSQISDPEGKTKREKGIQRSTETGMAVELSRNMSRQPSRESNNGSMNSCNSEG
NFCVSLNLGASSQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMIEKKGQLEVEVIRARG
LVQKPGSKSLPAPYVKVYLLNNGAYVAKKKTKIARKTLDPLYQQALLFEESPQGKVLQVI
VWGDYGRMDHKSFMGVAQILLDELDLSNTVIGWYKLFPPSSLVDPTLASLTRRASQSSLD
SSSGPPGVRT
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtggggccccacggcggccctcgcccacccaccgtgccgccgtccatg
ccggatctgccggaccttagccacctcaccgaggaggagcgcaagatcatcatggacgtg
atggctcggcagaagaaagaggaagagaaagaacaagaaatgctgaagacactgcaccag
cagtttgaaagctacaaacaggaagtgcgtcgcatcggggtcgagacgcgacgtcagcag
acgcagcagaaggacgacgctcccacctgtggcatttgccgcaagaccaagttcgctgat
ggctgtggtcatctctgctcatactgccagaccaaattctgcgctcgctgtggggggcgg
gtatctttgcgctccaacaatgtaatgtgggtttgcaacctgtgccgtaagcaacaggag
attctcaccaaatcaggagaatggttttcggggtcaggagcgcggcccgggagcctgggc
acctccttgaaagacccggccacaggaggtgagggtcagcgtgacaggaagcttctccgc
tccagatcgcaagctccgcccttcagcacaaacgcagggccgctggacgggacacagctg
cccgccggagtcctccctgccaaatctggtgacaccatgcctagctctcgctcccaaagt
gaaccaccaaaagaaaaaaaaaggccagtatcccttcatgagcaaaacggtaggggaggg
atgggacggggcagtggtcgcagacctcctggcaagcttcagtctcagtcatccctggac
gagcgtgtgagcactggagacagagagagacggtttggagaaggacggcgactggagaag
ataaattctcaagattatgaggatggggaggacaacttgaggcatacagggatgcaccgc
agacatccggaggatgaggaacagagggagaggcagcgccgtgaagaagagttccaaaat
cgttatcggagtgaccccaacctggcaaggtatcctgtaaaaccacaaaaagaggagcag
gagatgcgaatgcatgcaaaggtatccaaggtacggcacgagcgacggcacagtgatctt
gcgatcaatgaggttgggttgggaccaggtgaaggaggtggtgggggaggtcatgtacct
ccaaaccgtctggccaggaggggtggaggtggtggtgagggagagcgcaagggcctcatt
gagaaccaccgagcctttcctgttgacaggaccgcgggaatgggaggtggaccaccacct
acaggaggtggagggaaatcagggccccagactggagggctggtgcctaacaatcagggc
tcaaacaactcccgtccggagactggcacaacaagggacaagggtggggaccccctgttg
aggaaagactctcagagctcagaccagtccgattctttgcggccgccccctcctcggtca
tacaaaggcaagcgcggaatcaacaagagacagatgtccatcagcagctcagaagaggag
ggcggttccacgcccgagtacaccagctgtgacgacgtggacatggaaagcgtcagcgag
aaaggagatttggactgtcatcctttagatcctacagtatggcatcatccggttacgtgg
cagccgtctaaagagggtgaccacctgattggacgtatcacattaagcaagaggtcggcc
atgccccgcgaggccggctccctactgggcctcaaagttgttggaggaaagattacacag
tctggaagacttggggcctttatcaccaaagtcaaaaaaggcagcctggcagatgttgtg
ggacatctacgtgcaggtgacgaggtcttacagtggaatgggaagtcattgccaggagca
accaagaaagaagtgtacaacatcattcttgagtccaaggctgaacctcaagtggaaatt
gtagtctcaaggccaataggagacatcccaagaatcccagggtccccacaccctccacta
gaatccactggctccagttcgtttgagtcacagaagatggatcgtccctctatatcggtg
atgtcccctaccagtcctggcacccttcgagaccttccactggtgctgcctggacagctt
tctgtaaagctgtggtacgacaaagtgggtcaccagttgattgtcaacgtccttcaagcc
atagacctgccacctcgaccagacggccgacctcgaaacccatatgtcaaaatgtatttc
ctgccggatcggagtgacaagagtaaacgacggactaaaacggtgaagaagagctctgag
cccaagtggaaccagactttcatatattcccatgttcaccggcgggacttcagggagcgc
atgctggaaatcactgtctgggatcagcccagagtgcaggaggaagagagcgaatttctg
ggcgagatcctaatagagcttgagacggccttattggacgacaccccccactggtacaaa
ctccagactcatgacgtgtcctccatacctctgcctcagccatctccataccttccgcgc
cgacacgtccatggagacagtccaagcaagaaactacagaggtctcatcgcatcattgat
acagagtttgatgatggtttgataggtgggactaaaggtggagagcgaaactcccgtgag
agagatcggagcagcacgttggctgtcccagatcagcagcgccccatccagcaccgctcc
cgctccgtgtctcctcacagagaggactcctgcagggctcggtctcggcccccacacgtg
cccatgcaaaggagtttggatgagattcatcaaaaccgcaaccactcacattccccaaca
cactaccacgagtcctccctggagcaccagcgctccggcgactcagactacgagtattca
gaggacagcgaggtcctggagatgaacagatcaattcgaggcgggagtgcagagtgccta
cataccaacagctccaccctccctgcatgcctaaagagtaagccatataccaggcaagag
gggggcggcatcttgcctcgtagcatcctcacacaccgtgttctcaggttcacagacgag
gtcacggttagcgatctgcagccatccctggacagagtgaggagtgccagcaccacatgt
ctgagaccagacaccaactttcactcctctgacagagacaggtgctccaattctttgccc
cgcaggactcccccaagccccaggatcttagtagagcatgtggccccagaggaagagagg
gagagtattaattcatccagtctaaactgtctgtgggaaagcagaaagtgtcttgaactg
gacagtcgaattcagcccacctctatcctaaggggcagtagaagaagagggggccccctc
aggccctttgtacagacagtgctgtcaggttcctgtcctaactcgccgcgcccggacaga
gcacacccacacggcagcccttctcctccaactgtgttatccggtcgaaggggtcggcag
cttccacagctccctgcgaagagcagcagcatagagcatgccctagcagtggaggagcga
gcccgacagctgccaatgaaagtacattcctaccggccttcagcctcccacaactctcaa
acagacctcaagaccaaacgggagatgtacgcagagcagaggcgcagcagtgacaacatg
tcggctagatcttcggacagcgacatgagcgacgtgtcggctctctcccgtgccagcagt
gcctctcgtctcagtagcaccagttacatgtctatacaatcagagcggcccggaggacgg
ctcagtcggcagatgcgatcttctatgggtcggaacatgatgaagagctccagtgtgagc
ggtgagatctacacgcaggagcgcacagatggcagccaatcagacaccgctttgggcacc
gtaagcggtgggagcaagaagagacgctccagcatcagcgctcgcttcgtggccatcgtc
ggcaagaaccgcagccgcagcacctcacagatcagcgaccctgaggggaagactaaaagg
gaaaagggcatccagaggagcacagagactggcatggccgtggagctttccaggaacatg
agccgccagcccagcagagagtcgaacaacggcagcatgaacagctgcaactccgaggga
aatttctgtgttagtttaaatctgggtgccagcagccagttcagtgatttcctggatgga
ctgggaccagcacagttggtgggcaggcaaactctggctactcctgccataggtgacatt
cagattggaatgatagagaaaaaagggcagctggaggtggaggtcatcagagctcgagga
ctcgtacaaaagccaggatccaaatctctgcctgctccatatgtcaaagtctacctgctg
aataatggagcatatgtagccaaaaagaaaactaagattgcacggaaaacacttgacccc
ctgtaccagcaagcactgctgtttgaggagagcccacaggggaaagtcctacaggttatc
gtctggggtgactatggcaggatggaccataaaagtttcatgggagttgcacagattctg
ctggatgagttagacttgtcaaacacagtcattggttggtacaagctgttccctccgtcc
tctttggtcgatccgacgttggcatccctgacgcggagagcttcccaatcatcgcttgac
agctcctcggggccgcctggtgttcgaacctag
DBGET
integrated database retrieval system
