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Xenopus laevis (African clawed frog): 734172
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Entry
734172 CDS
T01010
Symbol
rpgr.S, rpgr, xrpgr
Name
(RefSeq) retinitis pigmentosa GTPase regulator S homeolog
KO
K19607
X-linked retinitis pigmentosa GTPase regulator
Organism
xla
Xenopus laevis (African clawed frog)
Brite
KEGG Orthology (KO) [BR:
xla00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xla03037
]
734172 (rpgr.S)
Cilium and associated proteins [BR:
xla03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
734172 (rpgr.S)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
CbiG_C
Motif
Other DBs
NCBI-GeneID:
734172
NCBI-ProteinID:
NP_001089142
Xenbase:
XB-GENE-982279
UniProt:
Q2N2B4
LinkDB
All DBs
Position
2S:50628599..50679729
Genome browser
AA seq
727 aa
AA seq
DB search
MATEEVEDQVPDSGALFTFGKSKFAENIPSKFWLKNDRPAHISCGDEHTVLVTGNGKLYV
FGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLYTEQGKLYSSGGNSEGQ
LGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEA
IYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRV
SGLSGKVKIVSCGGEHTIAVTEKEVYTFGLGQFGQLGHGTFIFETQLPKAVDVLTKKTIL
YVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGG
CHMLVFATPRPKESEMMINDELKENHFVVPSLNGDPEMSTSLQRSHSARLRRREKETSPE
QFRGLNRTLPPLRNHYLNSSLPATNKTVPPQLLQVSESNSKSSKGTHLHDLTPDSITDAA
DNKENIVQSFSANDTDSDSQPDGFGDTPDVLNMTHAMSINPANKTISFSPVQKRKEQAEE
SEEEDNSSEGLEEDDQDHVEKQVLEKELEEDEPEEVSEEEDEDDTKSENNKVKPSENRAA
ATLVKTAVESKVDNESEQPKSVNGIGSTENSATKPTLFEKTKRLSIFKRLSTASQKSLQE
SKEESDAVKEDTSTNNESLKQPVKDKDAKDENQNHKQENSKETEQSNQDSTETAQGRRSK
SSTCTLL
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaggaggtggaagatcaagtacctgattcgggtgctttatttacattcgga
aaaagtaagtttgcagaaaacattccaagcaagttctggttaaaaaatgataggccagct
cacatatcatgtggggatgaacacactgtgttggtaacaggaaatggaaaactctatgtg
tttggaagtaacaactggggacaactgggtttagaagctggaagtgctatcagcaagcca
acctgtgtaaaagcactaaaatctgaaaaggttgtgtttgcttcatgtggaagaaatcac
acattgctatacacagaacaaggaaagttgtattcctcaggtgggaatagtgagggacag
cttggcctaggggacacatcaggaaggactagttttcaagaaatttctttttttaatact
caatataaaattaaacaactctcagctggctcaaatacatcagcagctcttactgtggat
gggaaactttttatgtggggagacaactcagaaggtcaactgggcttggagaaagaagca
atctacagtactcctcaaaaaatcgatattggaaaacccatctcttggatttcctgtggc
tattaccattcagcctttgtaacgcaagatggggaattatatacctttggagaacctgaa
aatggaaaactcggtctcccctccgataagctaaaaaaacataaaaaacctcagcgtgtt
tcaggactgtctggaaaagtgaaaatagtgtcctgtggtggggaacacactatagcagta
acggaaaaagaagtatacacctttggccttggccagtttgggcagcttgggcacggcaca
tttatttttgaaacccagttaccaaaagcagtagatgtactaacaaagaagacaattcta
tatgttacttgtggagaaaaccacacagcagtaattacagacaagggacttctctataca
tttggagatgggaggcatggcaagcttggattaggggaggagaatttcaccaatcagttt
gtacctatcctgtgttcgaattttctaaagtttacagtgcagtcggtggcctgtggtgga
tgccatatgctagtctttgcaactccaaggcctaaggaatcagagatgatgatcaatgac
gaattaaaggaaaatcattttgtagttccttctctgaatggtgatcctgaaatgtctaca
tcattgcaaagatctcattctgcacgccttcgaagaagagagaaggagacatcacctgaa
caatttcgtggcctgaatagaacgttaccacctttgagaaatcattaccttaactcctct
ttacctgctacaaacaaaaccgttcctccacagttacttcaagtgagtgaatccaattcc
aagtcatccaaaggaacccacttacatgatctaacaccggactctattactgatgcggca
gacaacaaggaaaacattgttcaaagcttttctgcgaatgatactgatagcgacagtcaa
cctgatggatttggtgatactcctgatgtcttaaacatgacacatgcaatgagcattaat
cctgctaacaaaaccataagcttctcaccagtacagaaaagaaaagaacaggcagaggag
tctgaagaggaagataacagttctgaaggcttagaagaggatgatcaggaccatgttgaa
aaacaagtgttggaaaaagagctggaagaagatgagcctgaggaagtgtcagaagaagag
gacgaagatgataccaaaagtgaaaataataaagttaaaccctctgaaaacagagctgcc
gccacattggtgaagacggctgttgagagcaaagtcgataatgagagtgaacaacccaag
agtgtgaatggcattggttcaacagaaaacagtgccaccaaaccaactctgtttgagaaa
acgaaaaggctatccattttcaaaagactttctacagcaagccaaaaatctctgcaagag
agcaaagaagagtcagatgccgtgaaagaagacacaagtacaaacaatgaaagcctcaaa
cagccagttaaagacaaagatgcaaaagatgaaaatcaaaaccacaagcaggagaattct
aaagagactgagcagtcaaaccaggactctacagaaactgcacaaggcagaagatcaaag
tcatccacatgcacattattatga
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