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Submitted SNP(ss) Details: ss109543235           
Submitter
Handle1000GENOMES
Submitter SNP IDCEU.trio.12.15.2008_385784_chr2_56304360
RefSNP(rs#)rs6733298
Submitted Batch IDpilot_2_CEU_trio_final_release
Submitted DateMar 29, 2010
Publication CitedN.D.
First entry to dbSNPDec 16 2008 12:00:00:000AM
Assay
SpeciesHomo sapiens
Molecular
Type		Genomic
MethodTRIO_CONSENSUS_CALLS
Ascertainment Samplesize4
PopulationN.D.
Allele
Observed AlleleA/G
Ancestral AlleleN.D.
Allele OriginN/A
SNP ClassSNV
CpG CodeN.D.
Validation
Validation StatusNot Validated
HWE Goodness of Fitnot applicable
Variation
Frequency SubmissionN.D.
Genotype SummaryN.D.
Genotype SubmissionN.D.
HaplotypeN.D.
Comment
depth.cov:128

  Fasta sequence   (Legend) back to top
>gnl|dbSNP|ss109543235|allelePos=201|len=401|taxid=9606|alleles='A/G'|mol=Genomic
 TCCACTAAAA ATATAGATTC GAATCATTGC TTTCATGTTT GATACAATAA TCACCATTTT
 ACAGGTCAGT TACTTGTGTC AAAGAAGACA AACATTTCCT GACCAAACTA ACATATAACT
 GCAACCTGAT ATGCTTAGCC TGTAGCCTAA AGCGTAATAA GTCTAAAGGA GAATTTACTT
 CTGTATTTAA TCAGCGAAAA
 R
 TGCTCACTAT CTCTATATTA TTCTGACCAT CAATGTTTTT GCCCCAAAGC CTGGCCATAC
 AAATACCTGG AATGGCTACA TTGGAGATTT GAAAAGATAT GAGGGATCAG TTCTTTCCAT
 TTCCCTAAAT AACGCTCTGT GATCCACTTC AACTCTCTGA TGGCACCTTT AGGCTGCTAA
 CTGGCTTTCC CTACTTCTCT

  Submitted Frequency for ss109543235 back to top
There is no frequency submission for ss109543235.


  dbSNP summary of Genotypes for ss109543235 back to top
No sufficient data to compute Hardy-weinberg probability for ss109543235.


  Submitted individual genotype for ss109543235 back to top
There is no individual genotype data for ss109543235.

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