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The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history

Elife. 2018 Oct 16:7:e36426. doi: 10.7554/eLife.36426.

Abstract

The columbine genus Aquilegia is a classic example of an adaptive radiation, involving a wide variety of pollinators and habitats. Here we present the genome assembly of A. coerulea 'Goldsmith', complemented by high-coverage sequencing data from 10 wild species covering the world-wide distribution. Our analyses reveal extensive allele sharing among species and demonstrate that introgression and selection played a role in the Aquilegia radiation. We also present the remarkable discovery that the evolutionary history of an entire chromosome differs from that of the rest of the genome - a phenomenon that we do not fully understand, but which highlights the need to consider chromosomes in an evolutionary context.

Keywords: Aquilegia; chromosome evolution; chromosomes; gene expression; genetics; genome evolution; genomics; population genetics; speciation.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Adaptation, Biological*
  • Aquilegia / genetics*
  • Chromosomes, Plant*
  • Evolution, Molecular*
  • Gene Flow
  • Genome, Plant*
  • Plant Dispersal
  • Selection, Genetic
  • Sequence Analysis, DNA