There are eight types of Europe PMC content available for automated, bulk download:
Open access subset
Nearly
6.1 million
full text open access articles, supplementary files and figures
available to download using the Europe PMC web services or FTP site.
Author manuscript collection
Author manuscripts uploaded by authors to PubMed Central and Europe
PMC, to comply with funders’ Open Access policies, available in XML
and Text format via FTP.
Preprints subset
Preprint abstracts or full text, open access preprint articles,
available to download using the Europe PMC web services or in XML
format via FTP.
Metadata of all Full-Text Europe PMC articles
This FTP directory contains XML for key metadata for all articles
available from Europe PMC (metadata is extracted using the
lite response of the
Europe PMC API). It is updated weekly and archived quarterly.
Supplementary files
Supplementary files for all full-text articles available from Europe
PMC. The articles are divided into Open Access (OA) and Non-OA
directories. A folder is provided for each PMCID for which
supplementary files were provided with the article. The files are
updated quarterly.
PMID-PMCID-DOI mappings
A file of PMID-PMCID-DOI mappings, or partial mappings, available via
FTP. All PMIDs and PMCIDs are included, with the other two IDs shown
where available. The file is overwritten on the first of the month.
Accession numbers in Europe PMC articles
This FTP directory contains database accession numbers found in Europe
PMC articles, using text mining. It is updated weekly.
Deposition dates for author manuscripts
A CSV file of deposition dates and other citation details of author
manuscripts deposited in Europe PMC via the Europe PMC Plus submission
system, for the purposes of HEFCE REF compliance checking. The file is
updated monthly.